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BaseInfo

ncRNA ID novel_ahy_miR554
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:31482100-31482195 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 73 - CGGUUAAAACAACUGGAACACCGG - 96
Stem-loop(if miRNA) --                             C     AUAUAUAUUAU
  GGUGUUCUAGUUGUUUUAACCGUUGAUUU AAUUA           A
  ||||||||||||||||||||||||||||| |||||
  CCACAAGGUCAACAAAAUUGGCAACUAAA UUAAU           U
GG                             U     AUUUUUUUUAA
Stem-loop sequence GGUGUUCUAGUUGUUUUAACCGUUGAUUUCAAUUAAUAUAUAUUAUAUAAUUUUUUUUAUAAUUUAAAUCAACGGUUAAAACAACUGGAACACCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR570006.1
ncRNA:24   GGCCACAAGGUCAACAAAAUUGGC   1
  ||||||||||||||||||||||=|
targets:247   CCGGUGUUCCAGUUGUUUUAACUG   270

1.5 TSA: Arachis hypogaea Ahy.Unigene30319 mRNA sequence NA coding protein psRNATarget
GAER01037048.1
ncRNA:24   GGCCACAAGGUCAACAAAAUUGGC   1
  |=||||||||||||*|||||||||
targets:395   CUGGUGUUCCAGUUAUUUUAACCG   418

1.5 TSA: Arachis hypogaea Unigene37072 mRNA sequence NA coding protein psRNATarget