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BaseInfo

ncRNA ID novel_ahy_miR550
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:13261722-13261824 [+]
Reference genome Araip_v1.0
Source SRR1323745;SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UGAAGCUGCCAGCAUGAUCUA - 21
Stem-loop(if miRNA) --   A    - -             CUUU         ---AA    U   CA
  UGA GCUG C CAGCAUGAUCUAG    GGUUAGUGA     GCUA UAA  A
  ||| |||| | |||||||||||||    |||||||||     |||| |||
  ACU CGAC G GUCGUACUGGAUC    CCAAUUAUU     UGAU AUU  A
UC   C    C U             AUUU         AAACA    U   AG
Stem-loop sequence UGAAGCUGCCAGCAUGAUCUAGCUUUGGUUAGUGAAAGCUAUUAACAAAGAUUAUUAGUACAAAUUAUUAACCUUUACUAGGUCAUGCUGUGCCAGCCUCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR555230.1
ncRNA:21   AUCUAGUACGACCGUCGAAGU   1
  *||||||||||||||||||||
targets:214   AAGAUCAUGCUGGCAGCUUCA   234

0.0 TSA: Arachis hypogaea Ahy.Unigene15023 mRNA sequence NA coding protein psRNATarget
GAER01017135.1
ncRNA:21   AUCUAGUACGACCGUCGAAGU   1
  *||||||||||||||||||||
targets:233   AAGAUCAUGCUGGCAGCUUCA   253

0.0 TSA: Arachis hypogaea Unigene17143 mRNA sequence NA coding protein psRNATarget
GAER01005557.1
ncRNA:21   AUCUAGUACGACCGUCGAAGU   1
  *||||||||||||||||||||
targets:319   AAGAUCAUGCUGGCAGCUUCA   339

0.0 TSA: Arachis hypogaea Unigene5562 mRNA sequence NA coding protein psRNATarget