Search result

BaseInfo

ncRNA ID	novel_ahy_miR549
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B02:13997334-13997419 [-]
Reference genome	Araip_v1.0
Source	SRR1323745;SRR2922380;SRR2922381
Length	21
Mature sequence(if miRNA)	1 - UCGGACCAGGCUUCAUUCCCC - 21
Stem-loop(if miRNA)	--      UU                  CA     UC AA AU   GGAAUG  GUCUGGUUCGAAAUCAUU  UCAUC  G  U  G   ||||||  ||||||||||||||||||  |||||  |  |   CCUUAC  CGGACCAGGCUUUAGUGA  AGUAG  C  A  A CC      UU                  AA     GA GG AU
Stem-loop sequence	GGAAUGUUGUCUGGUUCGAAAUCAUUCAUCAUCUCGAAUAUGAUAAGGCAGGAUGAAAAGUGAUUUCGGACCAGGCUUCAUUCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01004180.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   ||||||||||||||||||||| targets:4   GGGGAAUGAAGCCUGGUCCGA   24 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene4182 mRNA sequence	NA	coding protein	psRNATarget
GAER01033028.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   ||||||||||||||||||||| targets:703   GGGGAAUGAAGCCUGGUCCGA   723 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene33050 mRNA sequence	NA	coding protein	psRNATarget
GAER01033028.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   |*||||||||||||||||||| targets:900   GAGGAAUGAAGCCUGGUCCGA   920 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene33050 mRNA sequence	NA	coding protein	psRNATarget
GAER01019611.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:114   CUGGAAUGAAGCCUGGUCCGG   134 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene19620 mRNA sequence	NA	coding protein	psRNATarget
GAER01019614.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:114   CUGGAAUGAAGCCUGGUCCGG   134 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene19623 mRNA sequence	NA	coding protein	psRNATarget
GAER01019610.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||||||||||||||||||= targets:825   CUGGAAUGAAGCCUGGUCCGG   845 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene19619 mRNA sequence	NA	coding protein	psRNATarget
JR540911.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:928   UUGGGAUGAAGCCUGGUCCGG   948 Target Full Sequence	2.0	TSA: Arachis hypogaea Ahy.Unigene191 mRNA sequence	NA	coding protein	psRNATarget
GAER01021484.1	ncRNA:21   CCCCUUACUUCGGACCAGGCU   1   **||=|||||||||||||||= targets:898   CUGGGAUGAAGCCUGGUCCGG   918 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene21495 mRNA sequence	NA	coding protein	psRNATarget