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BaseInfo

ncRNA ID novel_ahy_miR547
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:23168558-23168764 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 184 - UUAACUGAUAGCAUAUAUGACACA - 207
Stem-loop(if miRNA) --    C    AG         C  AUAAC    UC    A  CG A                      C   C          -----   GGUCAUAUUAGAAA
  UUAA UGAU  CAUAUAUGA AC     AUGU  AAUU GA  U GACUAAAUAUGUUUAUGAAAAU UGU AAUUUAGUCA     CUA              U
  |||| ||||  ||||||||| ||     ||||  |||| ||  | |||||||||||||||||||||| ||| ||||||||||     |||
  AAUU ACUA  GUAUAUAUU UG     UACA  UUAA CU  A CUGGUUUAUACAAAUACUUUUA AUA UUAAAUCAGU     AGG              A
AC    A    CU         A  GACUA    GA    C  AU A                      A   A          AAAAA   UUAAUGUUCUCAGG
Stem-loop sequence UUAACUGAUAGCAUAUAUGACACAUAACAUGUUCAAUUAGACGUAGACUAAAUAUGUUUAUGAAAAUCUGUCAAUUUAGUCACUAGGUCAUAUUAGAAAUAGGACUCUUGUAAUUGGAAAAAAUGACUAAAUUAAUAAAUUUUCAUAAACAUAUUUGGUCAAUAUCCAAUUAGACAUAUCAGGUAUUAUAUAUGUCAUCAAUUAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   ACACAGUAUAUACGAUAGUCAAUU   1
  ||||||||=|||||||||||||||
targets:724   UGUGUCAUGUAUGCUAUCAGUUAA   747

1.0 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01049126.1
ncRNA:24   AC--ACAGUAUAUACGAUAGUCAAUU   1
  ||--|||=*|||||||||||||||||
targets:44   UGAUUGUUUUAUAUGCUAUCAGUUAA   69

2.0 TSA: Arachis hypogaea Unigene49163 mRNA sequence NA coding protein psRNATarget
EZ735986.1
ncRNA:24   ACACAGUAUAUACGAUAGUCAAUU   1
  **|||=*|||||||||||||||||
targets:17   AUUGUUUUAUAUGCUAUCAGUUAA   40

2.0 TSA: Arachis hypogaea CL1Contig15002.Arhy mRNA sequence NA coding protein psRNATarget