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BaseInfo

ncRNA ID novel_ahy_miR545
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:11133149-11133198 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 27 - CAGGGUGAAUACAAAGGAACGGCU - 50
Stem-loop(if miRNA) --      G C  -   UG     A
  CUGUUU U UG GUU  UCCUG U
  |||||| | || |||  ||||| A
  GGCAAG A AC UAA  GGGAC G
UC      G A  A   GU     U
Stem-loop sequence CUGUUUGUCUGGUUUGUCCUGAUAGUCAGGGUGAAUACAAAGGAACGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01003572.1
ncRNA:24   UCGGCAAGGAAACAUAAGUGGGAC   1
  *||=*||||||||*|||||||||*
targets:197   UGCUUUUCCUUUGCAUUCACCCUC   220

2.5 TSA: Arachis hypogaea Unigene3574 mRNA sequence NA coding protein psRNATarget
EZ747806.1
ncRNA:24   UCGGCAAGGAAACAUAAGUGGGAC   1
  *||=*||||||||*|||||||||*
targets:147   UGCUUUUCCUUUGCAUUCACCCUC   170

2.5 TSA: Arachis hypogaea CL649Contig2.Arhy mRNA sequence NA coding protein psRNATarget
GAER01028920.1
ncRNA:24   UCGGCAAGGAAACAUAAGUGGGAC   1
  *||=*||||||||*|||||||||*
targets:197   UGCUUUUCCUUUGCAUUCACCCUC   220

2.5 TSA: Arachis hypogaea Unigene28938 mRNA sequence NA coding protein psRNATarget