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BaseInfo

ncRNA ID novel_ahy_miR540
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:126907322-126907441 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 100 - UAUAAUAACAAGGUUGAACAA - 120
Stem-loop(if miRNA) --                  C     C                      CAUUUCAAAUG
  UAUAAUAACAAGGUUGAA AAAAG GAAUAUUCAAUGAUAGGAUAAU           C
  |||||||||||||||||| ||||| ||||||||||||||||||||||
  AUAUUAUUGUUUCAACUU UUUUC CUUAUAAGUUAUUAUCCUAUUA           A
CC                  A     A                      AUCCUUUUCCA
Stem-loop sequence UAUAAUAACAAGGUUGAACAAAAGCGAAUAUUCAAUGAUAGGAUAAUCAUUUCAAAUGCAACCUUUUCCUAAUUAUCCUAUUAUUGAAUAUUCACUUUUAUUCAACUUUGUUAUUAUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01024031.1
ncRNA:21   AACAAGUUGGAACAAUAAUAU   1
  *||||||||*||||||||||*
targets:740   GUGUUCAACAUUGUUAUUAUU   760

2.5 TSA: Arachis hypogaea Unigene24042 mRNA sequence NA coding protein psRNATarget
GAER01044593.1
ncRNA:21   AACAAGUUGGAACAAUAAUAU   1
  **||*|||||*||||||||||
targets:2093   AAGUCCAACCAUGUUAUUAUA   2113

2.5 TSA: Arachis hypogaea Unigene44627 mRNA sequence NA coding protein psRNATarget