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BaseInfo

ncRNA ID novel_ahy_miR539
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:128453472-128453680 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - CAAAUAGAGUUCGAACCAAGCUGG - 24
Stem-loop(if miRNA) --   C           ----------A   - U CU    U CGAACCAGCCCGGUUCGAAUUACAAGGAAACCUUCUCUCUCUAUAAUUCGAACCACCAUGGUUCGAAUU
  GGC UGGUUCGAACU           UGA U G  GUAA U                                                                     A
  ||| |||||||||||           ||| | |  |||| |
  UCG ACCAAGCUUGA           AUU A G  CUUG G                                                                     C
GG   A           GAUAAACAAUC   U - --    - UCCACUCAAGCUUAAUCCCAAAAAACUACCAUUAUUUAGCUUGGUCGGACCAAGCUUAAUUCUUACUUC
Stem-loop sequence GGCCUGGUUCGAACUAUGAUUGCUGUAAUUCGAACCAGCCCGGUUCGAAUUACAAGGAAACCUUCUCUCUCUAUAAUUCGAACCACCAUGGUUCGAAUUACCUUCAUUCUUAAUUCGAACCAGGCUGGUUCGAUUUAUUACCAUCAAAAAACCCUAAUUCGAACUCACCUGGUUCGAUUUACUAACAAAUAGAGUUCGAACCAAGCUGG