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BaseInfo

ncRNA ID novel_ahy_miR538
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:106715416-106715500 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UCCAGUUAUUUUAAUCGUUGA - 21
Stem-loop(if miRNA) --       A     A        ----U   AUU         
  UCCAGUU UUUUA UCGUUGAU     UUA   AAUAUAUAUU
  ||||||| ||||| ||||||||     |||   |||||||||A
  AGGUCAA AAAAU GGCAACUA     AAU   UUAUAUAUAU
CA       C     A        UACCU   AUU         
Stem-loop sequence UCCAGUUAUUUUAAUCGUUGAUUUUAAUUAAUAUAUAUUAUAUAUAUAUUUUAUAAUCCAUAUCAACGGAUAAAACAACUGGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01009127.1
ncRNA:21   AGUUGCUAAUUUUAUUGACCU   1
  |=||||||||||||*||||||
targets:4   UUAACGAUUAAAAUUACUGGA   24

1.5 TSA: Arachis hypogaea Unigene9134 mRNA sequence NA coding protein psRNATarget
GAER01046856.1
ncRNA:21   AGUUGCUAAUUUUAUUGACCU   1
  ||||*|||||||||||||*||
targets:292   UCAAAGAUUAAAAUAACUAGA   312

2.5 TSA: Arachis hypogaea Unigene46891 mRNA sequence NA coding protein psRNATarget