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BaseInfo

ncRNA ID novel_ahy_miR536
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:126677894-126677999 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UAACUUAAUUUUAAAAUCGUCAUU - 24
Stem-loop(if miRNA) --       A         C      CGA    UUA      UCAGGGA      GGU
  UAACUUA UUUUAAAAU GUCAUU   ACCA   AAAUUU       UAAUUU   A
  ||||||| ||||||||| ||||||   ||||   ||||||       ||||||
  AUUGAAU AAAAUUUUA CAGUAA   UGGU   UUUAAA       AUUAAA   A
AA       C         A      AAA    ---      -------      AAU
Stem-loop sequence UAACUUAAUUUUAAAAUCGUCAUUCGAACCAUUAAAAUUUUCAGGGAUAAUUUGGUAAUAAAAAUUAAAAUUUUGGUAAAAAUGACAAUUUUAAAACUAAGUUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ743396.1
ncRNA:24   UUACUGCUAAAAUUUUAAUUCAAU   1
  ||*|||||||||||||*|||||||
targets:194   AAGGACGAUUUUAAAACUAAGUUA   217

1.5 TSA: Arachis hypogaea CL18074Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ721478.1
ncRNA:24   UUACUGCUAAAAUUUUAAUUCAAU   1
  ||--||*|||||||||*|||||||
targets:533   AA--ACAAUUUUAAAACUAAGUUA   554

2.5 TSA: Arachis hypogaea CL1Contig494.Arhy mRNA sequence NA coding protein psRNATarget