Search result

BaseInfo

ncRNA ID novel_ahy_miR529
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:95727208-95727390 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 25
Mature sequence(if miRNA) 1 - AUUUUCAAUUAGGUCCUUAUACUUA - 25
Stem-loop(if miRNA) --     C                  A           A   -A     A  AAC             C    C       -CU    AGUAA
  AUUUU AAUUAGGUCCUUAUACUU UUUUUUCUUUU AUU  GGUCC UG   CAAUUUUUUUUUU AAUU GGUCCCU   UAAC     U
  ||||| |||||||||||||||||| ||||||||||| |||  ||||| ||   ||||||||||||| |||| |||||||   ||||     U
  UAAAA UUAAUUCAGGGAUAUGAA AAAAAAGAAAA UAA  CCAGG AC   GUUAAAAAAAGAA UUAA CUAGGGA   AUUG     G
AA     A                  -           A   AC     G  AUA             -    U       UAU    AUUUG
Stem-loop sequence AUUUUCAAUUAGGUCCUUAUACUUAUUUUUUCUUUUAAUUAGGUCCAUGAACCAAUUUUUUUUUUCAAUUCGGUCCCUCUUAACAGUAAUUGGUUUAGUUAUAUAGGGAUCUAAUUAAGAAAAAAAUUGAUACAGGGACCCAAAUAAAAAGAAAAAAAAGUAUAGGGACUUAAUUAAAAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01013703.1
ncRNA:25   AUUCAUAUUCCUGGAUUAACUUUUA   1
  *||||||||||||||||||||||||
targets:233   AAAGUAUAAGGACCUAAUUGAAAAU   257

0.0 TSA: Arachis hypogaea Unigene13711 mRNA sequence NA coding protein psRNATarget
GAER01013962.1
ncRNA:25   AUUCAUAUUCCUGGAUUAACUUUUA   1
  *||*|||||*|||||||||||||||
targets:234   AAAAUAUAAAGACCUAAUUGAAAAU   258

1.0 TSA: Arachis hypogaea Unigene13970 mRNA sequence NA coding protein psRNATarget