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BaseInfo

ncRNA ID novel_ahy_miR526
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A03:6652637-6652850 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UUUUUAUUAAAAUUAGACUGGACA - 24
Stem-loop(if miRNA) --     A          A          C     AG         CAA        U                         ---       A  A  A    A   G
  UUUUU UUAAAAUUAG CUGGACAAAU AGUUU  CCGAAAAAU   UAAAUUAA UUUUGAAUUGGUCUAAAUUAAUAUU   UUUUAUA AA AU ACUA UAA G
  ||||| |||||||||| |||||||||| |||||  |||||||||   |||||||| |||||||||||||||||||||||||   ||||||| || || |||| ||| G
  AAAAA AGUUUUAAUC GAUUUGUUUA UUAAA  GGCUUUUUA   AUUUAGUU AGAACUUAAUCAGAUUUAAUUAUAA   AAAAUAU UU UA UGAU GUU U
AU     C          C          A     CU         -CC        U                         UAA       C  C  A    -   A
Stem-loop sequence UUUUUAUUAAAAUUAGACUGGACAAAUCAGUUUAGCCGAAAAAUCAAUAAAUUAAUUUUUGAAUUGGUCUAAAUUAAUAUUUUUUAUAAAAAAUAACUAAUAAGGGUAUUGUAGUAAUCUUCUAUAAAAAAUAAUAUUAAUUUAGACUAAUUCAAGAUUUGAUUUACCAUUUUUCGGUCAAAUUAAUUUGUUUAGCCUAAUUUUGACAAAAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01045384.1
ncRNA:24   ACAGGUCAGAUUAAAAUUAUUUUU   1
  ***=||*|||*|||||||||||||
targets:982   CUAUCACUCUUAUUUUAAUAAAAA   1005

2.0 TSA: Arachis hypogaea Unigene45418 mRNA sequence NA coding protein psRNATarget
GAER01044862.1
ncRNA:24   ACAGGUCAGAUUAAAAUUAUUUUU   1
  ||*==|*||||||||||||||*||
targets:87   UGCUUAUUCUAAUUUUAAUAAUAA   110

2.5 TSA: Arachis hypogaea Unigene44896 mRNA sequence NA coding protein psRNATarget
JR556349.1
ncRNA:24   ACAGGUCAGAUUAAAAUUAUUUUU   1
  ||*==|*||||||||||||||*||
targets:40   UGCUUAUUCUAAUUUUAAUAAUAA   63

2.5 TSA: Arachis hypogaea Ahy.Unigene16161 mRNA sequence NA coding protein psRNATarget
GAER01030887.1
ncRNA:24   ACAGGUCAGAUUAAAAUUAUUUUU   1
  |****|||=|||||||||*|||||
targets:2703   UAAGAAGUUUAAUUUUAAAAAAAA   2726

2.5 TSA: Arachis hypogaea Unigene30908 mRNA sequence NA coding protein psRNATarget
EZ729142.1
ncRNA:24   ACAGGUCAGAUUAAAAUUAUUUUU   1
  ||||||*||**|||||||||||||
targets:125   UGUCCAAUCCUAUUUUAAUAAAAA   148

3.0 TSA: Arachis hypogaea CL1Contig8158.Arhy mRNA sequence NA coding protein psRNATarget