ncRNA ID | novel_ahy_miR526 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A03:6652637-6652850 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUUAUUAAAAUUAGACUGGACA - 24 |
Stem-loop(if miRNA) |
--     A          A          C     AG         CAA        U                         ---       A  A  A    A   G   UUUUU UUAAAAUUAG CUGGACAAAU AGUUU  CCGAAAAAU   UAAAUUAA UUUUGAAUUGGUCUAAAUUAAUAUU   UUUUAUA AA AU ACUA UAA G   ||||| |||||||||| |||||||||| |||||  |||||||||   |||||||| |||||||||||||||||||||||||   ||||||| || || |||| ||| G   AAAAA AGUUUUAAUC GAUUUGUUUA UUAAA  GGCUUUUUA   AUUUAGUU AGAACUUAAUCAGAUUUAAUUAUAA   AAAAUAU UU UA UGAU GUU U AU     C          C          A     CU         -CC        U                         UAA       C  C  A    -   A |
Stem-loop sequence | UUUUUAUUAAAAUUAGACUGGACAAAUCAGUUUAGCCGAAAAAUCAAUAAAUUAAUUUUUGAAUUGGUCUAAAUUAAUAUUUUUUAUAAAAAAUAACUAAUAAGGGUAUUGUAGUAAUCUUCUAUAAAAAAUAAUAUUAAUUUAGACUAAUUCAAGAUUUGAUUUACCAUUUUUCGGUCAAAUUAAUUUGUUUAGCCUAAUUUUGACAAAAAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01045384.1 |
|
2.0 | TSA: Arachis hypogaea Unigene45418 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01044862.1 |
|
2.5 | TSA: Arachis hypogaea Unigene44896 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR556349.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene16161 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01030887.1 |
|
2.5 | TSA: Arachis hypogaea Unigene30908 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ729142.1 |
|
3.0 | TSA: Arachis hypogaea CL1Contig8158.Arhy mRNA sequence | NA | coding protein | psRNATarget |