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BaseInfo

ncRNA ID ath-miRf10369-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - UCAUGGUCGGAUUCAUCAUCCC - NA
Stem-loop(if miRNA)             C                     U -  UCCCUGGACAAUAAC
UAAGUGGGAUGA GGAUCUGACCAUGAUGGUGUU C GA               U
|||||||||||| ||||||||||||||||||||| | ||
AUUCGCCCUACU CUUAGGCUGGUACUACCACAA G CU               A
            A                     C U  UUAAAUACAUACUAC
Stem-loop sequence UAAGUGGGAUGACGGAUCUGACCAUGAUGGUGUUUCGAUCCCUGGACAAUAACUACAUCAUACAUAAAUUUCUGCAACACCAUCAUGGUCGGAUUCAUCAUCCCGCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_104704.2
ncRNA:22   CCCUACUACUUAGGCUGGUACU   1
  |||||||||=||||||||||||
targets:86   GGGAUGAUGGAUCCGACCAUGA   107

1.5 Arabidopsis thaliana Mannose-binding lectin superfamily protein partial mRNA Mannose-binding lectin superfamily protein(AT1G60130) coding protein psRNATarget
NM_001333881.1
ncRNA:22   CCCUACUACUUAGGCUGGUACU   1
  |||||||||=||||||||||||
targets:152   GGGAUGAUGGAUCCGACCAUGA   173

1.5 Arabidopsis thaliana Mannose-binding lectin superfamily protein partial mRNA Mannose-binding lectin superfamily protein(AT1G60130) coding protein psRNATarget
AK229108.1
ncRNA:22   CCCUACUACUUAGGCUGGUACU   1
  **|||||||=||||||||||||
targets:230   UUGAUGAUGGAUCCGACCAUGA   251

1.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-39-D01 NA coding protein psRNATarget
NM_104554.4
ncRNA:22   CCCUACUACUUAGGCUGGUACU   1
  **|||||||=||||||||||||
targets:253   UUGAUGAUGGAUCCGACCAUGA   274

1.5 Arabidopsis thaliana Mannose-binding lectin superfamily protein mRNA Mannose-binding lectin superfamily protein(AT1G57570) coding protein psRNATarget