Search result

BaseInfo

ncRNA ID	novel_ahy_miR524
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A01:99673453-99673589 [+]
Reference genome	Aradu_v1.0
Source	SRR1323745
Length	24
Mature sequence(if miRNA)	114 - UGUUGGAACUCUGGAUCAGACUGC - 137
Stem-loop(if miRNA)	-AUUG  -       -  G  C        AUAUUUCA     -   C   ACACAUU  G    A   UUAU      CU AUUCAGA UU CA ACAGUGAU        UGAAC GCA CAA       GA AUUG UUG    U      || ||||||| || || ||||||||        ||||| ||| |||       || |||| |||      GA UAGGUCU AA GU UGUCACUA        ACUUG CGU GUU       CU UAAC AGC    U CGUCA  C       C  G  -        ----CUCC     U   A   -AUUCUU  G    -   UUGU
Stem-loop sequence	AUUGCUAUUCAGAUUGCACACAGUGAUAUAUUUCAUGAACGCACCAAACACAUUGAGAUUGAUUGUUAUUUUGUUCGACAAUGUCUUCUUAUUGAUGCUGUUCACCUCAUCACUGUUGGAACUCUGGAUCAGACUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JR554953.1	ncRNA:24   CGUCAGACUAGGUCUCAAGGUUGU   1   *=**||||||=|||||||*||||| targets:384   CUUCUCUGAUUCAGAGUUGCAACA   407 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene14738 mRNA sequence	NA	coding protein	psRNATarget
GAER01020865.1	ncRNA:24   CGUCAGACUAGGUCUCAAGGUUGU   1   *=**||||||=|||||||*||||| targets:9   CUUCUCUGAUUCAGAGUUGCAACA   32 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene20875 mRNA sequence	NA	coding protein	psRNATarget
GAER01025751.1	ncRNA:24   CGUCAGACUAGGUCUCAAGGUUGU   1   *=***||||||||||*|||||||* targets:1620   AUCACCUGAUCCAGAAUUCCAACU   1643 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene25768 mRNA sequence	NA	coding protein	psRNATarget
GAER01025747.1	ncRNA:24   CGUCAGACUAGGUCUCAAGGUUGU   1   *=***||||||||||*|||||||* targets:1661   AUCACCUGAUCCAGAAUUCCAACU   1684 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene25764 mRNA sequence	NA	coding protein	psRNATarget
GAER01025750.1	ncRNA:24   CGUCAGACUAGGUCUCAAGGUUGU   1   *=***||||||||||*|||||||* targets:1695   AUCACCUGAUCCAGAAUUCCAACU   1718 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene25767 mRNA sequence	NA	coding protein	psRNATarget
GAER01025746.1	ncRNA:24   CGUCAGACUAGGUCUCAAGGUUGU   1   *=***||||||||||*|||||||* targets:1736   AUCACCUGAUCCAGAAUUCCAACU   1759 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene25763 mRNA sequence	NA	coding protein	psRNATarget
GAER01013073.1	ncRNA:24   CGUCAGACUAGGUCUCAAGGUUGU   1   ||=|*=|*||=||||||||||||| targets:325   GCGGCUUCAUUCAGAGUUCCAACA   348 Target Full Sequence	3.0	TSA: Arachis hypogaea Unigene13081 mRNA sequence	NA	coding protein	psRNATarget