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BaseInfo

ncRNA ID novel_ahy_miR521
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:1791202-1791358 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UAUUUUAAUAAUUAAAUCGACGGC - 24
Stem-loop(if miRNA) --      AA    U           AAC         ---U        UAAU       G U           UUUAUU
  UAUUUU  UAAU AAAUCGACGGC   GUUGUCGAU    UUGUAUAA    AUUGACA U UUUUUGUCGAU      A
  ||||||  |||| |||||||||||   |||||||||    ||||||||    ||||||| | |||||||||||      A
  AUGGAA  AUUA UUUAGCUGUCG   CGACAGCUA    AAUAUAUU    UAACUGU A AAAAGCAGCUA      A
AA      GA    U           AAA         UAAU        ---U       G C           UAAACU
Stem-loop sequence UAUUUUAAUAAUUAAAUCGACGGCAACGUUGUCGAUUUUGUAUAAUAAUAUUGACAGUUUUUUUGUCGAUUUUAUUAAAUCAAAUAUCGACGAAAACAGUGUCAAUUUUAUAUAAUAAUAUCGACAGCAAAGCUGUCGAUUUUAUUAAGAAGGUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ748390.1
ncRNA:24   CGGCAGCUAAAUUAAUAAUUUUAU   1
  *==**|*|||||||||||||||||
targets:539   AUUACCAAUUUAAUUAUUAAAAUA   562

1.0 TSA: Arachis hypogaea CL2537Contig1.Arhy mRNA sequence NA coding protein psRNATarget