ncRNA ID |
novel_ahy_miR517 |
Species |
Arachis hypogaea |
Class |
miRNA |
Genome position |
Aradu.A02:24771124-24771334 [-] |
Reference genome |
Aradu_v1.0 |
Source |
SRR1323745
|
Length |
24 |
Mature sequence(if miRNA) |
188 - UUAACUGAUAGCAUAUAUGACACA - 211 |
Stem-loop(if miRNA) |
--    C      C     UG C  A        UC       CG  A    U         AA     C   C      ---------A       -CUU        U
  UUAA UGAUAG AUAUA  A AC UAAUAUGU  AAUUGGA  UU ACUA AUAUGUUUA  AAAAU UAU AAUUUA          UUAGUUA    GGUCAUAU G
  |||| |||||| |||||  | || ||||||||  |||||||  || |||| |||||||||  ||||| ||| ||||||          |||||||    |||||||| G
  AAUU ACUAUU UAUAU  U UG AUUAUACA  UUAAUCU  AA UGGU UAUAUAAAU  UUUUA AUA UUAAAU          GAUUAAU    UUAGUAUA G
GC    A      A     GU A  G        GA       AU  C    U         AC     A   A      CAGUAAAAAG       AUUU        A
|
Stem-loop sequence |
UUAACUGAUAGCAUAUAUGACACAUAAUAUGUUCAAUUGGACGUUAACUAUAUAUGUUUAAAAAAAUCUAUCAAUUUAAUUAGUUACUUGGUCAUAUUGGGAAUAUGAUUUUUAUAAUUAGGAAAAAUGACUAAAUUAAUAAAUUUUCAUAAAUAUAUUUGGUCAAUAUCUAAUUAGACAUAUUAGGUAUUGUAUAUAUUAUCAAUUAACG
|