ncRNA ID | novel_ahy_miR513 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A02:79444834-79445058 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGUCUUUCGAGAUAAUUGUCAGGG - 24 |
Stem-loop(if miRNA) |
--          C         A   C   AU  C           CAC     UC     C   ----      UUU     U   U    -  A           GCACUCA         UUGACAAUUA UUCGAAAGA CAA GAG  UU UAACAAAAAAA   UCAAU  GGCCU UGG    UAUUUU   GGGAC GAU AGCC CU UGCCAAAAAAA       AUUCGGC   |||||||||| ||||||||| ||| |||  || |||||||||||   |||||  ||||| |||    ||||||   ||||| ||| |||| || |||||||||||       ||||||C   GACUGUUAAU GAGCUUUCU GUU CUC  GA AUUGUUUUUUU   AGUUG  CUGGA ACU    AUAGAA   UCUUG UUG UCGG GA ACGGUUUUUUU       UAGGUCU GG          A         -   A   CG  -           -UA     GA     A   GUUA      CUU     -   U    U  C           -------       |
Stem-loop sequence | UUGACAAUUACUUCGAAAGAACAACGAGAUUUCUAACAAAAAAACACUCAAUUCGGCCUCUGGUAUUUUUUUGGGACUGAUUAGCCCUAUGCCAAAAAAAGCACUCAAUUCGGCCUCUGGAUUUUUUUUGGCACAGUGGCUUGUUGUUCUUUCAAGAUAAUUGUCAAAGGUCAGGUUGAAUUUUUUUUGUUAAGGCCUCAUUGUCUUUCGAGAUAAUUGUCAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR552149.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene11811 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01057268.1 |
|
3.0 | TSA: Arachis hypogaea Unigene57313 mRNA sequence | NA | coding protein | psRNATarget |