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BaseInfo

ncRNA ID novel_ahy_miR511
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:87181663-87181774 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUAUUAGUGACUGAUUUUGGUGUA - 24
Stem-loop(if miRNA) --            C            CCAUUAAUA      UAU      ---    
  UACUAAAAUCAG CAUUAAUAUAAG         UAGUUA   AUAAAU   ACUUG
  |||||||||||| ||||||||||||         ||||||   ||||||   ||||U
  GUGGUUUUAGUC GUGAUUAUAUUU         AUUAAU   UAUUUA   UGAGA
AU            A            -UAUAUAUA      -UU      AUU    
Stem-loop sequence UACUAAAAUCAGCCAUUAAUAUAAGCCAUUAAUAUAGUUAUAUAUAAAUACUUGUAGAGUUUAAUUUAUUUUAAUUAAUAUAUAUUUUAUAUUAGUGACUGAUUUUGGUGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01050512.1
ncRNA:24   AUGUGGUUUUAGUCAGUGAUUAUA   1
  |||||||||||||||||||||*||
targets:335   UACACCAAAAUCAGUCACUAAAAU   358

1.5 TSA: Arachis hypogaea Unigene50550 mRNA sequence NA coding protein psRNATarget
EZ755629.1
ncRNA:24   AUGUGGUUUUAGUCAGUGAUUAUA   1
  ||||=||||||||||||||||*||
targets:185   UACAUCAAAAUCAGUCACUAAAAU   208

1.5 TSA: Arachis hypogaea CL1213Contig4.Arhy mRNA sequence NA coding protein psRNATarget
JR574174.1
ncRNA:21   UGGUUUUAGUCAGUGAUUAUA   1
  ||=||||||||*|||||||||
targets:1   ACUAAAAUCAGCCACUAAUAU   21

2.5 TSA: Arachis hypogaea Ahy.Unigene37211 mRNA sequence NA coding protein psRNATarget
GAER01055217.1
ncRNA:24   AUG-UGGUUUUAGUCAGUGAUUAUA   1
  *||-|*|||||||=||||||||||*
targets:119   GACUAACAAAAUCGGUCACUAAUAG   143

2.5 TSA: Arachis hypogaea Unigene55259 mRNA sequence NA coding protein psRNATarget