Search result

BaseInfo

ncRNA ID novel_ahy_miR510
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:88065939-88066037 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 76 - UUUACACUGUAAAUGAGAUAAGGC - 99
Stem-loop(if miRNA) --                          UUAUCAU          UAUA    U
  UUUACACUGUAAAUGAGAUAAGGCAC       AAUAUGUAUU    GAUG G
  ||||||||||||||||||||||||||       ||||||||||    |||| A
  AAAUGUGAUAUUUGCUCUAUUCUGUG       UUAUACAUAA    UUAC U
GC                          ------U          ----    A
Stem-loop sequence UUUACACUGUAAAUGAGAUAAGGCACUUAUCAUAAUAUGUAUUUAUAGAUGUGAUACAUUAAUACAUAUUUGUGUCUUAUCUCGUUUAUAGUGUAAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR578749.1
ncRNA:24   CGGAAUAGAGUAAAUGUCACAUUU   1
  *|||||||||||||||||||||||
targets:45   ACCUUAUCUCAUUUACAGUGUAAA   68

0.0 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CGGAAUAGAGUAAAUGUCACAUUU   1
  |*=|||||||||||||||||||||
targets:23   GGUUUAUCUCAUUUACAGUGUAAA   46

0.0 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
GAER01058827.1
ncRNA:24   CG-GAAUAGAGUAAAUGUCACAUUU   1
  ||-|*||||||=|||||||||||||
targets:79   GCACGUAUCUCGUUUACAGUGUAAA   103

1.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CGGAAUAGAGUAAAUGUCACAUUU   1
  **||||||||=||||||*||||||
targets:177   UACUUAUCUCGUUUACACUGUAAA   200

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
GAER01003583.1
ncRNA:24   CGGAAU-AGAGUAAAUGUCACAUUU   1
  *=||*|-|||*||||||||||||||
targets:256   UUCUCACUCUGAUUUACAGUGUAAA   280

3.0 TSA: Arachis hypogaea Unigene3585 mRNA sequence NA coding protein psRNATarget