ncRNA ID | novel_ahy_miR505 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A02:12956935-12957099 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR2922381 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUGCAACGGCUAGCUGACGUG - 21 |
Stem-loop(if miRNA) |
--   C         C   CG       A                     --       AAACCCU    A C       UUAU   CUG AACGGCUAG UGA  UGGCGAG GUUGUAUUUGUAUUCAAUUUA  CUCCCUG       AAUU U UUAUUAU    C   ||| ||||||||| |||  ||||||| |||||||||||||||||||||  |||||||       |||| | |||||||   GAC UUGUCGAUC ACU  ACCGCUC CAACAUAAACAUAAGUUAAAU  GGGGGGC       UUGA A AGUAAUA    G AU   C         A   AU       C                     CA       -AUAAUU    A C       UUGA |
Stem-loop sequence | CUGCAACGGCUAGCUGACGUGGCGAGAGUUGUAUUUGUAUUCAAUUUACUCCCUGAAACCCUAAUUAUCUUAUUAUUUAUCGAGUUAUAAUGACAAAGUUUUAAUACGGGGGGACUAAAUUGAAUACAAAUACAACCCUCGCCAUAUCAACUAGCUGUUCCAGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR556400.1 |
|
0.0 | TSA: Arachis hypogaea Ahy.Unigene16212 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01047534.1 |
|
0.0 | TSA: Arachis hypogaea Unigene47570 mRNA sequence | NA | coding protein | psRNATarget |