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BaseInfo

ncRNA ID novel_ahy_miR505
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:12956935-12957099 [+]
Reference genome Aradu_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 1 - CUGCAACGGCUAGCUGACGUG - 21
Stem-loop(if miRNA) --   C         C   CG       A                     --       AAACCCU    A C       UUAU
  CUG AACGGCUAG UGA  UGGCGAG GUUGUAUUUGUAUUCAAUUUA  CUCCCUG       AAUU U UUAUUAU    C
  ||| ||||||||| |||  ||||||| |||||||||||||||||||||  |||||||       |||| | |||||||
  GAC UUGUCGAUC ACU  ACCGCUC CAACAUAAACAUAAGUUAAAU  GGGGGGC       UUGA A AGUAAUA    G
AU   C         A   AU       C                     CA       -AUAAUU    A C       UUGA
Stem-loop sequence CUGCAACGGCUAGCUGACGUGGCGAGAGUUGUAUUUGUAUUCAAUUUACUCCCUGAAACCCUAAUUAUCUUAUUAUUUAUCGAGUUAUAAUGACAAAGUUUUAAUACGGGGGGACUAAAUUGAAUACAAAUACAACCCUCGCCAUAUCAACUAGCUGUUCCAGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR556400.1
ncRNA:21   GUGCAGUCGAUCGGCAACGUC   1
  |||||||||||||||||||||
targets:117   CACGUCAGCUAGCCGUUGCAG   137

0.0 TSA: Arachis hypogaea Ahy.Unigene16212 mRNA sequence NA coding protein psRNATarget
GAER01047534.1
ncRNA:21   GUGCAGUCGAUCGGCAACGUC   1
  |||||||||||||||||||||
targets:153   CACGUCAGCUAGCCGUUGCAG   173

0.0 TSA: Arachis hypogaea Unigene47570 mRNA sequence NA coding protein psRNATarget