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BaseInfo

ncRNA ID novel_ahy_miR496
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:63839039-63839218 [+]
Reference genome Aradu_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 157 - UUACAAAUUUUAAUUCUCUUUAGG - 180
Stem-loop(if miRNA) --                   C      G   C  C         A               U                U  --CU     A
  UAAAGAGAAUUAAAAUUUG AAUUUA UCC CG CGUUCAAAA GUGUUUGAUUUAACA AAUAUUCUUAGCAUAU CU    AUUUU A
  ||||||||||||||||||| |||||| ||| || ||||||||| ||||||||||||||| |||||||||||||||| ||    ||||| C
  AUUUCUCUUAAUUUUAAAC UUAAAU AGG GC GCAAGUUUU CACAAACUAAAUUGU UUAUAAGAGUUGUAUA GA    UAGAA A
GG                   A      A   A  A         -               C                C  UUCU     G
Stem-loop sequence UAAAGAGAAUUAAAAUUUGCAAUUUAGUCCCCGCCGUUCAAAAAGUGUUUGAUUUAACAUAAUAUUCUUAGCAUAUUCUCUAUUUUAACAGAAGAUUCUUAGCAUAUGUUGAGAAUAUUCUGUUAAAUCAAACACUUUUGAACGACGAGGAAUAAAUUACAAAUUUUAAUUCUCUUUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01053614.1
ncRNA:24   GGAUUUCUCUUAAUUUUAAACAUU   1
  =*||||*||||||||||||||*||
targets:67   UAUAAACAGAAUUAAAAUUUGAAA   90

2.5 TSA: Arachis hypogaea Unigene53654 mRNA sequence NA coding protein psRNATarget