ncRNA ID | novel_ahy_miR496 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A01:63839039-63839218 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR2922381 |
Length | 24 |
Mature sequence(if miRNA) | 157 - UUACAAAUUUUAAUUCUCUUUAGG - 180 |
Stem-loop(if miRNA) |
--                   C      G   C  C         A               U                U  --CU     A   UAAAGAGAAUUAAAAUUUG AAUUUA UCC CG CGUUCAAAA GUGUUUGAUUUAACA AAUAUUCUUAGCAUAU CU    AUUUU A   ||||||||||||||||||| |||||| ||| || ||||||||| ||||||||||||||| |||||||||||||||| ||    ||||| C   AUUUCUCUUAAUUUUAAAC UUAAAU AGG GC GCAAGUUUU CACAAACUAAAUUGU UUAUAAGAGUUGUAUA GA    UAGAA A GG                   A      A   A  A         -               C                C  UUCU     G |
Stem-loop sequence | UAAAGAGAAUUAAAAUUUGCAAUUUAGUCCCCGCCGUUCAAAAAGUGUUUGAUUUAACAUAAUAUUCUUAGCAUAUUCUCUAUUUUAACAGAAGAUUCUUAGCAUAUGUUGAGAAUAUUCUGUUAAAUCAAACACUUUUGAACGACGAGGAAUAAAUUACAAAUUUUAAUUCUCUUUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01053614.1 |
|
2.5 | TSA: Arachis hypogaea Unigene53654 mRNA sequence | NA | coding protein | psRNATarget |