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BaseInfo

ncRNA ID novel_ahy_miR490
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:7863197-7863353 [+]
Reference genome Aradu_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 1 - AUGGAAGUAUGUUCGUAGAUGUGU - 24
Stem-loop(if miRNA) --                               -A     C    UU   AU     -UUA   GAAAUGUCUUUAUAG
  AUGGAAGUAUGUUCGUAGAUGUGUCUAAUAA  AAUGU UUUU  AUA  UGUGU    AUA               A
  |||||||||||||||||||||||||||||||  ||||| ||||  |||  |||||    |||               U
  UACCUUCAUGCAAGCAUCUACACAGAUUAUU  UUAUA AAAA  UAU  AUAUA    UCU               A
AA                               AA     U    UU   GU     UUUC   GUGUAGGUCUUUUAU
Stem-loop sequence AUGGAAGUAUGUUCGUAGAUGUGUCUAAUAAAAAUGUCUUUUUUAUAAUUGUGUUUAAUAGAAAUGUCUUUAUAGAUAUAUUUUCUGGAUGUGUCUCUUUAUAUAUGUAUUUAAAAUAUAUUAAUUAUUAGACACAUCUACGAACGUACUUCCAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR546305.1
ncRNA:24   UGUGUAGAUGCUUGUAUGAAGGUA   1
  |||||||*|||||||*||||||||
targets:8   ACACAUCCACGAACACACUUCCAU   31

2.5 TSA: Arachis hypogaea Ahy.Unigene5750 mRNA sequence NA coding protein psRNATarget
GAER01035600.1
ncRNA:24   UGUGUAGAUGCUUGUAUGAAGGUA   1
  |||||||*|||||||*||||||||
targets:489   ACACAUCCACGAACACACUUCCAU   512

2.5 TSA: Arachis hypogaea Unigene35623 mRNA sequence NA coding protein psRNATarget