Search result

BaseInfo

ncRNA ID	novel_ahy_miR489
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A02:93004917-93004992 [-]
Reference genome	Aradu_v1.0
Source	SRR1323745
Length	24
Mature sequence(if miRNA)	53 - UAAAGUUGAUAGUUGAGAGUCGUU - 76
Stem-loop(if miRNA)	---U            U      C    A    UUUGA     AAAGUUGAUAGU GAGAGU GUUA AUGA     C     |||||||||||| |||||| |||| ||||     U     UUUCAACUAUUA UUCUCA CAAU UAUU     A GUAC            U      A    A    UUUAA
Stem-loop sequence	UAAAGUUGAUAGUUGAGAGUCGUUAAAUGAUUUGACUAAAUUUUUAUAUAACAACUCUUUAUUAUCAACUUUCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JR554492.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||||=|||||||||||||||||| targets:2430   AACGAUUCUCAACUAUCAACUUUA   2453 Target Full Sequence	1.0	TSA: Arachis hypogaea Ahy.Unigene14265 mRNA sequence	NA	coding protein	psRNATarget
GAER01034499.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||||=|||||||||||||||||| targets:2457   AACGAUUCUCAACUAUCAACUUUA   2480 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene34522 mRNA sequence	NA	coding protein	psRNATarget
GAER01039538.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   ||=||||=|||||||||||||||| targets:455   AAUGACUUUCAACUAUCAACUUUA   478 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene39565 mRNA sequence	NA	coding protein	psRNATarget
EZ748410.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||||||||||||||||||=|||| targets:66   AACGACUCUCAACUAUCAAUUUUA   89 Target Full Sequence	1.5	TSA: Arachis hypogaea CL2606Contig3.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR554367.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||||||||||||||||||=|||| targets:49   AACGACUCUCAACUAUCAAUUUUA   72 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene14135 mRNA sequence	NA	coding protein	psRNATarget
GAER01040999.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   ||||||||||||||||||||||*| targets:134   AACGACUCUCAACUAUCAACUUCA   157 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene41030 mRNA sequence	NA	coding protein	psRNATarget
GAER01025962.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   ||||||||||||||||||||||*| targets:1322   AACGACUCUCAACUAUCAACUUCA   1345 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene25979 mRNA sequence	NA	coding protein	psRNATarget
JR557125.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   ||=|||||||||||||||||||*| targets:132   AAUGACUCUCAACUAUCAACUUCA   155 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene16954 mRNA sequence	NA	coding protein	psRNATarget
EZ730526.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||*=|||||||||||||||||*| targets:245   AACAGCUCUCAACUAUCAACUUCA   268 Target Full Sequence	1.5	TSA: Arachis hypogaea CL1Contig9542.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR556801.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||*=|||||||||||||||||*| targets:234   AACAGCUCUCAACUAUCAACUUCA   257 Target Full Sequence	1.5	TSA: Arachis hypogaea Ahy.Unigene16625 mRNA sequence	NA	coding protein	psRNATarget
EZ727045.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||*=|||||||||||||||||*| targets:1147   AACAGCUCUCAACUAUCAACUUCA   1170 Target Full Sequence	1.5	TSA: Arachis hypogaea CL1Contig6061.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ752365.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||||=|=|||||||||||||||| targets:144   AACGAUUUUCAACUAUCAACUUUA   167 Target Full Sequence	2.0	TSA: Arachis hypogaea CL3186Contig2.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ736594.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||||=||||||=||||||||||| targets:639   AACGAUUCUCAAUUAUCAACUUUA   662 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1348Contig2.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ745548.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   ||=|||||||||||||||||||*= targets:313   AAUGACUCUCAACUAUCAACUUCG   336 Target Full Sequence	2.5	TSA: Arachis hypogaea CL7522Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ749420.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||*==||||||=||||||||||| targets:1   AACAGUUCUCAAUUAUCAACUUUA   24 Target Full Sequence	2.5	TSA: Arachis hypogaea CL7475Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR571763.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   ||=*=||*||||||||=||||||| targets:182   AAUUGCUAUCAACUAUUAACUUUA   205 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene33389 mRNA sequence	NA	coding protein	psRNATarget
JR564238.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   ||=*=||*||||||||=||||||| targets:204   AAUUGCUAUCAACUAUUAACUUUA   227 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene24336 mRNA sequence	NA	coding protein	psRNATarget
EZ723276.1	ncRNA:24   UUGCUGAGAGUUGAUAGUUGAAAU   1   |||||=|=|=|||||||||||||| targets:1000   AACGAUUUUUAACUAUCAACUUUA   1023 Target Full Sequence	3.0	TSA: Arachis hypogaea CL1Contig2292.Arhy mRNA sequence	NA	coding protein	psRNATarget