ncRNA ID | novel_ahy_miR488 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A10:18144014-18144161 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR2922381 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUGAUGUGGCUUGAUGACGUG - 21 |
Stem-loop(if miRNA) |
--C        CUU      --      CAU     ACACA   -    C       -  ---      U    ---U   CC    UGAUGUGG   GAUGAC  GUGGAC   UAGUG     UGA CAUG UGGCAUG GC   CAGGUG GCCA    GUG  A    ||||||||   ||||||  ||||||   |||||     ||| |||| ||||||| ||   |||||| ||||    |||    ACUGUAUC   CUAUUG  CACCUG   AUUAC     ACU GUAC ACCGUAU CG   GUUUAC CGGU    CAU  A UGC        -AC      UA      -UU     ----A   C    -       A  AUU      -    UUAU   AA |
Stem-loop sequence | CUGAUGUGGCUUGAUGACGUGGACCAUUAGUGACACAUGACAUGCUGGCAUGGCCAGGUGUGCCAUGUGCCAAAAUACUAUUUGGCCAUUUGUUAGCAUAUGCCACAUGCUCAACAUUAUUGUCCACAUGUUAUCCACUAUGUCACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ740561.1 |
|
3.0 | TSA: Arachis hypogaea CL1914Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ740562.1 |
|
3.0 | TSA: Arachis hypogaea CL1914Contig2.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR552963.1 |
|
3.0 | TSA: Arachis hypogaea Ahy.Unigene12673 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01025784.1 |
|
3.0 | TSA: Arachis hypogaea Unigene25801 mRNA sequence | NA | coding protein | psRNATarget |