ncRNA ID | novel_ahy_miR477 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A08:46620231-46620439 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR2922381 |
Length | 22 |
Mature sequence(if miRNA) | 188 - AAUUGAUCUAACUCUUGAAAUU - 209 |
Stem-loop(if miRNA) |
--AAUUGAUCUAA           --A         -                      -                       A    A    -CUAU        U              CUCUUGAAAUU   CAAGUUUUA AUUAUGUUUAAUUUAUUUUUUU AUUUGAAUUUGUUUGAUAUAACU AUAU UUUU     GCAUAUAA G              |||||||||||   ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||     ||||||||              GAGAACUUUAA   GUUCAAAGU UAAUACAAAUUGAAUAAAAAAG UGAAUUUAAACAAACUAUAUUGA UAUG AAAA     UGUGUAUU A AAUUAAUCACAUC           CAA         C                      A                       C    A    UAACU        U |
Stem-loop sequence | AAUUGAUCUAACUCUUGAAAUUACAAGUUUUAAUUAUGUUUAAUUUAUUUUUUUAUUUGAAUUUGUUUGAUAUAACUAAUAUAUUUUCUAUGCAUAUAAUGAUUUAUGUGUUCAAUAAAAAGUAUCAGUUAUAUCAAACAAAUUUAAGUAGAAAAAAUAAGUUAAACAUAAUCUGAAACUUGAACAAUUUCAAGAGCUACACUAAUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ737583.1 |
|
1.5 | TSA: Arachis hypogaea CL5612Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |