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BaseInfo

ncRNA ID novel_ahy_miR477
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A08:46620231-46620439 [-]
Reference genome Aradu_v1.0
Source SRR2922381
Length 22
Mature sequence(if miRNA) 188 - AAUUGAUCUAACUCUUGAAAUU - 209
Stem-loop(if miRNA) --AAUUGAUCUAA           --A         -                      -                       A    A    -CUAU        U
             CUCUUGAAAUU   CAAGUUUUA AUUAUGUUUAAUUUAUUUUUUU AUUUGAAUUUGUUUGAUAUAACU AUAU UUUU     GCAUAUAA G
             |||||||||||   ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||     ||||||||
             GAGAACUUUAA   GUUCAAAGU UAAUACAAAUUGAAUAAAAAAG UGAAUUUAAACAAACUAUAUUGA UAUG AAAA     UGUGUAUU A
AAUUAAUCACAUC           CAA         C                      A                       C    A    UAACU        U
Stem-loop sequence AAUUGAUCUAACUCUUGAAAUUACAAGUUUUAAUUAUGUUUAAUUUAUUUUUUUAUUUGAAUUUGUUUGAUAUAACUAAUAUAUUUUCUAUGCAUAUAAUGAUUUAUGUGUUCAAUAAAAAGUAUCAGUUAUAUCAAACAAAUUUAAGUAGAAAAAAUAAGUUAAACAUAAUCUGAAACUUGAACAAUUUCAAGAGCUACACUAAUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ737583.1
ncRNA:22   UUAAAGUUCUCAAUCUAGUUAA   1
  ==*||||||||||*||||||||
targets:231   GGGUUCAAGAGUUUGAUCAAUU   252

1.5 TSA: Arachis hypogaea CL5612Contig1.Arhy mRNA sequence NA coding protein psRNATarget