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BaseInfo

ncRNA ID novel_ahy_miR450
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:18687797-18687961 [-]
Reference genome Aradu_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 145 - CUGCAACGGCUAGCUGACGUG - 165
Stem-loop(if miRNA) --   C         C   C        A                            AAACCC    UAUCUUAUUAUUUAUCU
  CUG AACGGCUAG UGA GUGGCGAG GUUGUAUUUGUAUCCAAUUUAGUCCCUC      UAAU                 G
  ||| ||||||||| ||| |||||||| ||||||||||||||||||||||||||||      ||||                 A
  GAC UUGUCGAUC ACU CACCGCUC CAACAUAAACAUAGGUUAAAUCAGGGGG      CAAU                 G
GU   A         A   A        C                            ----AA    UUUGAAACAGUAAUAUU
Stem-loop sequence CUGCAACGGCUAGCUGACGUGGCGAGAGUUGUAUUUGUAUCCAAUUUAGUCCCUCAAACCCUAAUUAUCUUAUUAUUUAUCUGAGUUAUAAUGACAAAGUUUUAACAAGGGGGACUAAAUUGGAUACAAAUACAACCCUCGCCACAUCAACUAGCUGUUACAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR556400.1
ncRNA:21   GUGCAGUCGAUCGGCAACGUC   1
  |||||||||||||||||||||
targets:117   CACGUCAGCUAGCCGUUGCAG   137

0.0 TSA: Arachis hypogaea Ahy.Unigene16212 mRNA sequence NA coding protein psRNATarget
GAER01047534.1
ncRNA:21   GUGCAGUCGAUCGGCAACGUC   1
  |||||||||||||||||||||
targets:153   CACGUCAGCUAGCCGUUGCAG   173

0.0 TSA: Arachis hypogaea Unigene47570 mRNA sequence NA coding protein psRNATarget