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BaseInfo

ncRNA ID novel_ahy_miR448
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:86922509-86922674 [-]
Reference genome Aradu_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 146 - CUGCAACGGCUAGCUGACGUG - 166
Stem-loop(if miRNA) --   C         C   C        A              A      C      AAACCC    UAUCUUAUUAUUUAUCU
  CUG AACGGCUAG UGA GUGGCGAG GUUGUAUUUGUAUC AAUUUA UCCCUC      UAAU                 G
  ||| ||||||||| ||| |||||||| |||||||||||||| |||||| ||||||      ||||                 A
  GAC UUGCCGAUC ACU CACCGCUC CAACAUAAACAUAG UUAAAU AGGGGG      CAAU                 G
UU   A         A   A        C              G      C      ---AAA    UUUGAAACAGUAAUAUU
Stem-loop sequence CUGCAACGGCUAGCUGACGUGGCGAGAGUUGUAUUUGUAUCAAAUUUACUCCCUCAAACCCUAAUUAUCUUAUUAUUUAUCUGAGUUAUAAUGACAAAGUUUUAACAAAGGGGGACUAAAUUGGAUACAAAUACAACCCUCGCCACAUCAACUAGCCGUUACAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR556400.1
ncRNA:21   GUGCAGUCGAUCGGCAACGUC   1
  |||||||||||||||||||||
targets:117   CACGUCAGCUAGCCGUUGCAG   137

0.0 TSA: Arachis hypogaea Ahy.Unigene16212 mRNA sequence NA coding protein psRNATarget
GAER01047534.1
ncRNA:21   GUGCAGUCGAUCGGCAACGUC   1
  |||||||||||||||||||||
targets:153   CACGUCAGCUAGCCGUUGCAG   173

0.0 TSA: Arachis hypogaea Unigene47570 mRNA sequence NA coding protein psRNATarget