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BaseInfo

ncRNA ID novel_ahy_miR445
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:42745072-42745136 [+]
Reference genome Aradu_v1.0
Source SRR2922381
Length 20
Mature sequence(if miRNA) 46 - GUAGGACGUGAGGUUUCUCG - 65
Stem-loop(if miRNA) --  GG     UG     C  CCA  CG    U
  GG  ACCUC  GUUCU AC   UG  GAUU U
  ||  |||||  ||||| ||   ||  ||||
  UC  UGGAG  CAGGA UG   AC  UUAG G
GC  UU     UG     -  UAG  UU    U
Stem-loop sequence GGGGACCUCUGGUUCUCACCCAUGCGGAUUUUGUGAUUUUCAGAUGUAGGACGUGAGGUUUCUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ742327.1
ncRNA:20   GCUCUUUGGAGUGCAGGAUG   1
  ||||||||||||||||||=|
targets:309   CGAGAAACCUCACGUCCUGC   328

1.5 TSA: Arachis hypogaea CL10700Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR543574.1
ncRNA:20   GCUCUUUGGAGUGCAGGAUG   1
  ||||||=|||||||||||=|
targets:163   CGAGAAGCCUCACGUCCUGC   182

2.5 TSA: Arachis hypogaea Ahy.Unigene2944 mRNA sequence NA coding protein psRNATarget