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BaseInfo

ncRNA ID novel_ahy_miR444
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:27689953-27690043 [-]
Reference genome Aradu_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 71 - CAGCCAAGAAUGACUUGCCGG - 91
Stem-loop(if miRNA) --C  C      UG            A   UAUA         GU
   AG CAAGAA  ACUUGCCGGAAU AUA    AAAUAAGUA  U
   || ||||||  |||||||||||| |||    |||||||||  A
   UC GUUCUU  UGAACGGUUUUA UAU    UUUGUUCAU  U
ACA  A      GU            A   UAAA         GA
Stem-loop sequence CAGCCAAGAAUGACUUGCCGGAAUAAUAUAUAAAAUAAGUAGUUAUAGUACUUGUUUAAAUUAUAAUUUUGGCAAGUUGUUCUUGACUACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR542360.1
ncRNA:21   GGCCGUUCAGUAAGAACCGAC   1
  *||||||*||||||||||||*
targets:1244   GCGGCAAAUCAUUCUUGGCUU   1264

2.0 TSA: Arachis hypogaea Ahy.Unigene1705 mRNA sequence NA coding protein psRNATarget
EZ744418.1
ncRNA:21   GGCCGUUCAGUAAGAACCGAC   1
  |*|||||*||||||||||||*
targets:233   CAGGCAACUCAUUCUUGGCUC   253

2.0 TSA: Arachis hypogaea CL2021Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR559543.1
ncRNA:21   GGCCGUUCAGUAAGAACCGAC   1
  |*|||||*||||||||||||*
targets:1208   CAGGCAACUCAUUCUUGGCUC   1228

2.0 TSA: Arachis hypogaea Ahy.Unigene19480 mRNA sequence NA coding protein psRNATarget
GAER01006670.1
ncRNA:21   GGCCGUUCAGUAAGAACCGAC   1
  *=*|*||||||||||||||||
targets:111   AUAGAAAGUCAUUCUUGGCUG   131

2.0 TSA: Arachis hypogaea Unigene6676 mRNA sequence NA coding protein psRNATarget
JR583393.1
ncRNA:21   GGCCGUUCAGUAAGAACCGAC   1
  *=*|*||||||||||||||||
targets:80   AUAGAAAGUCAUUCUUGGCUG   100

2.0 TSA: Arachis hypogaea Ahy.Unigene49273 mRNA sequence NA coding protein psRNATarget