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BaseInfo

ncRNA ID novel_ahy_miR436
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:80962677-80962801 [+]
Reference genome Aradu_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 105 - UAGCGUGCUCAUCAUGUCAUG - 125
Stem-loop(if miRNA) --   AC      -   C    UC     CCAAUUUA      -   -UCA    UCCGAAUCU AUUUUAUC
  UGA  CAUGAU AGC UGUU  ACUGA        GAACAA GUC    AGAA         G        A
  |||  |||||| ||| ||||  |||||        |||||| |||    ||||         |        A
  ACU  GUACUA UCG GCGA  UGAUU        UUUGUU CGG    UCUU         G        U
GU   --      C   U    -U     --------      A   UAAC    --------C AACGCCUC
Stem-loop sequence UGAACCAUGAUAGCCUGUUUCACUGACCAAUUUAGAACAAGUCUCAAGAAUCCGAAUCUGAUUUUAUCAAUCUCCGCAAGCUUCUCAAUGGCAUUGUUUUUAGUUAGCGUGCUCAUCAUGUCAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01041041.1
ncRNA:21   GUACUGUACUACUCGUGCGAU   1
  |||||||||||||||||*|||
targets:558   CAUGACAUGAUGAGCACACUA   578

1.5 TSA: Arachis hypogaea Unigene41072 mRNA sequence NA coding protein psRNATarget