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BaseInfo

ncRNA ID novel_ahy_miR432
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A04:840955-841132 [-]
Reference genome Aradu_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 1 - CUGAGAACCGUUAGAUGAAAAUUU - 24
Stem-loop(if miRNA) --         A   AAC          ----AA      G  A         --G    UC    UCAAUU          --U  U    U
  AUUUUCAUU GAC   UCUCAGUUGU      ACUUUA GU AAGUUGAUU   CACC  UUGA      UUUAGUAUUU   CU GUCA C
  ||||||||| |||   ||||||||||      |||||| || |||||||||   ||||  ||||      ||||||||||   || |||| A
  UAAAAGUAG UUG   AGAGUCGAUA      UGAAGU CA UUCAGCUGA   GUGG  AAUU      AAAUCAUAAA   GA UAGU U
UU         A   CCA          GUUGAA      G  C         AAG    -U    UUUAUU          UAU  U    U
Stem-loop sequence AUUUUCAUUAGACAACUCUCAGUUGUAAACUUUAGGUAAAGUUGAUUGCACCUCUUGAUCAAUUUUUAGUAUUUUCUUGUCAUCAUUUGAUUAGUAUAAAUACUAAAUUAUUUUUAAUGGUGGAAAGUCGACUUCACGUGAAGUAAGUUGAUAGCUGAGAACCGUUAGAUGAAAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01004465.1
ncRNA:24   UUUAAAAGUAGAUUGCCAAGAGUC   1
  ||||||||||||||||||||||||
targets:116   AAAUUUUCAUCUAACGGUUCUCAG   139

0.0 TSA: Arachis hypogaea Unigene4467 mRNA sequence NA coding protein psRNATarget
GAER01025960.1
ncRNA:24   UUUAAAAGUAGAUUGCCAAGAGUC   1
  |||||||||||||||||*||||||
targets:1229   AAAUUUUCAUCUAACGGCUCUCAG   1252

1.5 TSA: Arachis hypogaea Unigene25977 mRNA sequence NA coding protein psRNATarget
GAER01054132.1
ncRNA:24   UUUAAAAGUAGAUUGCCAAGAGUC   1
  |||||||||||||||||*||||||
targets:160   AAAUUUUCAUCUAACGGCUCUCAG   183

1.5 TSA: Arachis hypogaea Unigene54173 mRNA sequence NA coding protein psRNATarget
GAER01039359.1
ncRNA:24   UUUAAAAGUAGAUUGCCAAGAGUC   1
  |*|||*|=|||||||||||||||*
targets:148   AUAUUAUUAUCUAACGGUUCUCAA   171

3.0 TSA: Arachis hypogaea Unigene39386 mRNA sequence NA coding protein psRNATarget