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BaseInfo

ncRNA ID novel_ahy_miR417
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A02:81586553-81586636 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 61 - UUUACACUGUAAACGAGAUACGUG - 84
Stem-loop(if miRNA) --               A      C      -U       UC
  CGUAUCUUGUUUACA UGUAAA GAGAUA  ACACGUG  A
  ||||||||||||||| |||||| ||||||  |||||||  U
  GCAUAGAGCAAAUGU ACAUUU CUCUAU  UGUGUAC  U
GU               C      A      UC       CC
Stem-loop sequence CGUAUCUUGUUUACAAUGUAAACGAGAUAUACACGUGUCAUUCCCAUGUGUCUUAUCUCAUUUACACUGUAAACGAGAUACGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   GUGCAUAGAGCAAAUGUCACAUUU   1
  ||||||||||||||||||||||||
targets:80   CACGUAUCUCGUUUACAGUGUAAA   103

0.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GUGC---AUAGAGCAAAUGUCACAUUU   1
  ||=|---||||||*|||||||||||||
targets:20   CAUGGUUUAUCUCAUUUACAGUGUAAA   46

1.0 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   GUGC---------AUAGAGCAAAUGUCACAUUU   1
  ||||---------||||||*|||||||||||||
targets:36   CACGCCCCAACCUUAUCUCAUUUACAGUGUAAA   68

1.0 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GUGCAUAGAGCAAAUGUCACAUUU   1
  =||*|||||||||||||*||||||
targets:177   UACUUAUCUCGUUUACACUGUAAA   200

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   GUGC---AUAGAGCAAAUGUCACAUUU   1
  ===|---|||*|||||||=||||||||
targets:144   UGUGCCUUAUGUCGUUUAUAGUGUAAA   170

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget