Search result

BaseInfo

ncRNA ID ath-miRf10358-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUUGGGGUCAAGCGGUCCAC - NA
Stem-loop(if miRNA)      A   GAUG      A          A A   GAUC  UU   UAAGU   -A  A
UCUAG AGG    GGAUUG UUGAUCCCAA G GUG    GA  AAC     GUC  CG C
||||| |||    |||||| |||||||||| | |||    ||  |||     |||  ||
AGAUC UCC    CCUGGC AACUGGGGUU C CAC    CU  UUG     UAG  GC G
     A   ---A      G          - -   -AAA  UU   ----U   AA  U
Stem-loop sequence UCUAGAAGGGAUGGGAUUGAUUGAUCCCAAAGAGUGGAUCGAUUAACUAAGUGUCACGACGUCGAAGAUUGUUUUUCAAACACCUUGGGGUCAAGCGGUCCACCUACUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BX830046.1
ncRNA:20   CACCUGGCGAACUGGGGUUC   1
  ||||||*|||||||||||||
targets:488   GUGGACAGCUUGACCCCAAG   507

1.0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZF08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget
BT003381.1
ncRNA:20   CACCUGGCGAACUGGGGUUC   1
  ||||||*|||||||||||||
targets:905   GUGGACAGCUUGACCCCAAG   924

1.0 Arabidopsis thaliana unknown protein (At5g57330) mRNA, complete cds NA coding protein psRNATarget
AY093119.1
ncRNA:20   CACCUGGCGAACUGGGGUUC   1
  ||||||*|||||||||||||
targets:1082   GUGGACAGCUUGACCCCAAG   1101

1.0 Arabidopsis thaliana unknown protein (At5g57330) mRNA, complete cds NA coding protein psRNATarget
NM_125115.4
ncRNA:20   CACCUGGCGAACUGGGGUUC   1
  ||||||*|||||||||||||
targets:1211   GUGGACAGCUUGACCCCAAG   1230

1.0 Arabidopsis thaliana Galactose mutarotase-like superfamily protein mRNA Galactose mutarotase-like superfamily protein(AT5G57330) coding protein psRNATarget