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BaseInfo

ncRNA ID novel_ahy_miR413
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A10:51071458-51071540 [+]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - GACGCGGACGCGUGAGUGACGCAG - 24
Stem-loop(if miRNA) --G      A       G G    A   -  AUGG   G    
   ACGCGG CGCGUGA U ACGC GUC GC    UGC UGAUA
   |||||| ||||||| | |||| ||| ||    ||| ||||A
   UGCGCU GCGCAUU G UGCG CAG CG    GUG ACUGG
CAG      A       G G    -   A  --CA   G    
Stem-loop sequence GACGCGGACGCGUGAGUGACGCAGUCGCAUGGUGCGUGAUAAGGUCAGGUGACGCAGACGCGUGGGUUACGCGAUCGCGUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR552220.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  **||||||=*||||||||||||||
targets:184   GCGCGUCAUCCACGCGUCCGCGUC   207

2.0 TSA: Arachis hypogaea Ahy.Unigene11885 mRNA sequence NA coding protein psRNATarget
GAER01052248.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  **||||||=*||||||||||||||
targets:162   GCGCGUCAUCCACGCGUCCGCGUC   185

2.0 TSA: Arachis hypogaea Unigene52286 mRNA sequence NA coding protein psRNATarget
GAER01050035.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  ||||||||=||||||||=||||||
targets:110   CUGCGUCAUUCACGCGUUCGCGUC   133

2.5 TSA: Arachis hypogaea Unigene50072 mRNA sequence NA coding protein psRNATarget
JR571501.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  |*|||||||*||||||*|||||||
targets:42   CCGCGUCACCCACGCGACCGCGUC   65

2.5 TSA: Arachis hypogaea Ahy.Unigene32818 mRNA sequence NA coding protein psRNATarget
GAER01030965.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  **||||||*||||||||*||||||
targets:159   ACGCGUCAGUCACGCGUACGCGUC   182

2.5 TSA: Arachis hypogaea Unigene30986 mRNA sequence NA coding protein psRNATarget
GAER01030964.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  **||||||*||||||||*||||||
targets:143   ACGCGUCAGUCACGCGUACGCGUC   166

2.5 TSA: Arachis hypogaea Unigene30985 mRNA sequence NA coding protein psRNATarget
GAER01014989.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  **||||||*||||||||*||||||
targets:77   ACGCGUCAGUCACGCGUACGCGUC   100

2.5 TSA: Arachis hypogaea Unigene14997 mRNA sequence NA coding protein psRNATarget
GAER01033448.1
ncRNA:24   GACGCAGUGAGUGCGCAGGCGCAG   1
  |**=||||*|||=|||||||||||
targets:69   CCAUGUCAGUCAUGCGUCCGCGUC   92

2.5 TSA: Arachis hypogaea Unigene33470 mRNA sequence NA coding protein psRNATarget