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BaseInfo

ncRNA ID novel_ahy_miR406
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A10:14784081-14784160 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 23
Mature sequence(if miRNA) 58 - UAACGACUCUUAACUAUCAACUU - 80
Stem-loop(if miRNA) --   C   A    A               ------      U
  GUU AUA UUAA AGUCGUUAGAUAAUU      AUUUAA U
  ||| ||| |||| |||||||||||||||      ||||||
  CAA UAU AAUU UCAGCAAUUUAUUAA      UAAAUU A
UU   C   C    C               AUUAUU      A
Stem-loop sequence GUUCAUAAUUAAAAGUCGUUAGAUAAUUAUUUAAUUAAUUAAAUUUAUUAAAUUAUUUAACGACUCUUAACUAUCAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01005017.1
ncRNA:23   UUCAACUAUCAAUUCUCAGCAAU   1
  |||||*|||||||||||||||||
targets:93   AAGUUAAUAGUUAAGAGUCGUUA   115

1.0 TSA: Arachis hypogaea Unigene5021 mRNA sequence NA coding protein psRNATarget
GAER01023296.1
ncRNA:23   UUCAACUAUCAAUUCUCAGCAAU   1
  ||||||||||||||||*||||||
targets:132   AAGUUGAUAGUUAAGAAUCGUUA   154

1.5 TSA: Arachis hypogaea Unigene23307 mRNA sequence NA coding protein psRNATarget
EZ734664.1
ncRNA:23   UUCAACUAUCAAUUCUCAGCAAU   1
  ||||||||||||||||*||||||
targets:203   AAGUUGAUAGUUAAGAAUCGUUA   225

1.5 TSA: Arachis hypogaea CL1Contig13680.Arhy mRNA sequence NA coding protein psRNATarget
GAER01027320.1
ncRNA:23   UUCAACUAUCAAUUCUCAGCAAU   1
  ||*|||||||||=||||||||||
targets:1072   AAAUUGAUAGUUGAGAGUCGUUA   1094

1.5 TSA: Arachis hypogaea Unigene27338 mRNA sequence NA coding protein psRNATarget