ncRNA ID | ath-miRf10357-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CUUGUCCAAAAGCUGACUAUA - NA |
Stem-loop(if miRNA) |
                  A           C       C   A UCCAUUUAAUUAUAGUCA CUUUUGGACAA CCCAAAA UGA G |||||||||||||||||| ||||||||||| ||||||| ||| G AGGUAAAUUAAUAUCAGU GAAAACCUGUU GGGUUUU AUU G                   C           C       -   U |
Stem-loop sequence | UCCAUUUAAUUAUAGUCAACUUUUGGACAACCCCAAAACUGAAGGGUUUAUUUUGGGCUUGUCCAAAAGCUGACUAUAAUUAAAUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_113777.1 |
|
2.5 | Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein partial mRNA | P-loop containing nucleoside triphosphate hydrolases superfamily protein(AT3G28570) | coding protein | psRNATarget | |||||||||
NM_001338960.1 |
|
2.5 | Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein mRNA | P-loop containing nucleoside triphosphate hydrolases superfamily protein(AT3G28570) | coding protein | psRNATarget |