ncRNA ID | novel_ahy_miR405 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A10:20487433-20487590 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 135 - CUUAUCUCGUUUAUACUGUGAACG - 158 |
Stem-loop(if miRNA) |
--       C              C       U   A     U   UA      G         A   AG       GA   CUUAUCU GUUUAUACUGUGAA GAGAUAA UUU UACGU UCU  UUUACA UGUAAAUGA AUA  ACACGUG  C   ||||||| |||||||||||||| ||||||| ||| ||||| |||  |||||| ||||||||| |||  |||||||  G   GAAUAGA CAAAUGUGACACUU CUCUAUU GAA GUGCA AGA  AAAUGU ACAUUUGCU UAU  UGUGCAC  U GA       A              U       U   G     U   GC      G         C   -A       AG |
Stem-loop sequence | CUUAUCUCGUUUAUACUGUGAACGAGAUAAUUUUAUACGUUUCUUAUUUACAGUGUAAAUGAAAUAAGACACGUGGACGUGACACGUGUAUAUCUCGUUUACAGUGUAAACGAGAUACGUGGAAGUUUAUCUCUUUCACAGUGUAAACAAGAUAAGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR578749.1 |
|
1.0 | TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR574604.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence | NA | coding protein | psRNATarget |