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BaseInfo

ncRNA ID novel_ahy_miR400
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A10:102154793-102154880 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - ACUCUCAACUAUUAACUUUACGUG - 24
Stem-loop(if miRNA) --UAUC           A            ---          AG
      AAGUUAAUAGU GAGAGUCAUUAA   AUAAUUUAAU  A
      ||||||||||| ||||||||||||   ||||||||||  U
      UUCAAUUAUCA CUCUCAGUAAUU   UGUUAAAUUA  U
GUGCAU           A            UAC          GU
Stem-loop sequence UAUCAAGUUAAUAGUAGAGAGUCAUUAAAUAAUUUAAUAGAUUUGAUUAAAUUGUCAUUUAAUGACUCUCAACUAUUAACUUUACGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000404.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  ==||||||||||||||||||||||
targets:200   UGCGUAAAGUUAAUAGUUGAGAGU   223

0.0 TSA: Arachis hypogaea Unigene404 mRNA sequence NA coding protein psRNATarget
GAER01005017.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  =|=|||||||||||||||*|||||
targets:87   UAUGUAAAGUUAAUAGUUAAGAGU   110

1.5 TSA: Arachis hypogaea Unigene5021 mRNA sequence NA coding protein psRNATarget
EZ745600.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  *||||=|||||||||||||||||*
targets:1162   GACGUGAAGUUAAUAGUUGAGAGA   1185

2.0 TSA: Arachis hypogaea CL7808Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01010760.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  |||||=|||||=||||||||||||
targets:150   CACGUGAAGUUGAUAGUUGAGAGU   173

2.5 TSA: Arachis hypogaea Unigene10768 mRNA sequence NA coding protein psRNATarget
EZ722147.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  |||||=|||||=||||||||||||
targets:218   CACGUGAAGUUGAUAGUUGAGAGU   241

2.5 TSA: Arachis hypogaea CL1Contig1163.Arhy mRNA sequence NA coding protein psRNATarget
EZ747471.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  =||||||||||=|||||||||||*
targets:532   UACGUAAAGUUGAUAGUUGAGAGC   555

2.5 TSA: Arachis hypogaea CL20093Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01052086.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  |||*|=|||||=||||||||||||
targets:244   CACCUGAAGUUGAUAGUUGAGAGU   267

2.5 TSA: Arachis hypogaea Unigene52124 mRNA sequence NA coding protein psRNATarget
GAER01027320.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  |*||||||*||=||||||||||||
targets:1066   CUCGUAAAAUUGAUAGUUGAGAGU   1089

2.5 TSA: Arachis hypogaea Unigene27338 mRNA sequence NA coding protein psRNATarget
EZ740945.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  ||=*||||||||||||||||*||*
targets:742   CAUAUAAAGUUAAUAGUUGAUAGC   765

2.5 TSA: Arachis hypogaea CL3446Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ756881.1
ncRNA:24   GUGCAUUUCAAUUAUCAACUCUCA   1
  *|=*|||||*||||||||||||*|
targets:1003   GAUUUAAAGAUAAUAGUUGAGAAU   1026

2.5 TSA: Arachis hypogaea CL6802Contig1.Arhy mRNA sequence NA coding protein psRNATarget