Search result

BaseInfo

ncRNA ID	novel_ahy_miR397
Species	Arachis hypogaea
Class	miRNA
Genome position	Aradu.A10:108132592-108132710 [+]
Reference genome	Aradu_v1.0
Source	SRR2922380
Length	24
Mature sequence(if miRNA)	1 - UGACUGAUUUUAGUGGCUGAUUUU - 24
Stem-loop(if miRNA)	-UGACUGAU            U    A      AA            UUUAAU     UU          UUUAGUGGCUGA UUUA UGUACA  UAGUAUUUUUGA      AAUUA  G          |||||||||||| |||| ||||||  ||||||||||||      |||||  A          AAAUUAUUGAUU AAAU AUAUGU  AUUAUAAAAACU      UUGAU  U UUAUUAAUU            U    C      GC            ---UUU     CU
Stem-loop sequence	UGACUGAUUUUAGUGGCUGAUUUUAAUGUACAAAUAGUAUUUUUGAUUUAAUAAUUAUUGAUUCUAGUUUUUUCAAAAAUAUUACGUGUAUACUAAAUUUAGUUAUUAAAUUAAUUAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ755629.1	ncRNA:24   UUUUAGUCGGUGAUUUUAGUCAGU   1   ||||||||=||||||||||||||| targets:191   AAAAUCAGUCACUAAAAUCAGUCA   214 Target Full Sequence	1.0	TSA: Arachis hypogaea CL1213Contig4.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01054907.1	ncRNA:24   UUUUAGUCGGUGAUUUUAGUCAGU   1   *|||||||==|||||||||||||| targets:95   UAAAUCAGUUACUAAAAUCAGUCA   118 Target Full Sequence	2.0	TSA: Arachis hypogaea Unigene54949 mRNA sequence	NA	coding protein	psRNATarget
JR576171.1	ncRNA:24   UUUUAGUCGGUGAUUUUAGUCAGU   1   ||||||||=|||||||||||||=| targets:115   AAAAUCAGUCACUAAAAUCAGUUA   138 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene39208 mRNA sequence	NA	coding protein	psRNATarget
GAER01050512.1	ncRNA:24   UUUUAGUCGGUGAUUUUAGUCAGU   1   ||||||||=||||||||||||*|| targets:341   AAAAUCAGUCACUAAAAUCAGCCA   364 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene50550 mRNA sequence	NA	coding protein	psRNATarget