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BaseInfo

ncRNA ID	ath-miRf10356-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UACUCGACCAAGGGGUCGAGUGUG - NA
Stem-loop(if miRNA)	G         AAGGG             GGUA    GAAUGGUCAAGUGG      AGUGGUGUGACAAAGUGUUGCUUGCCGAUGCGGUCGAGUGGUGUCA AU AUACUCGAC     GGUCGAGUAAUGU    GAGU              UUGUCA                                              U || |||||||||     |||||||||||||    ||||              ||||||                                              C UG UGUGAGCUG     CCAGCUCAUUGUA    CUCG              CAAGAA                                              G   G         GGGAA             --AC    -------------G      CGGUUAGUGAGCUGGGGUACCAGCUCAUUGGUGUGAGGUCCAAUGA
Stem-loop sequence	AUGAUACUCGACAAGGGGGUCGAGUAAUGUGGUAGAGUGAAUGGUCAAGUGGUUGUCAAGUGGUGUGACAAAGUGUUGCUUGCCGAUGCGGUCGAGUGGUGUCAUCGAGUAACCUGGAGUGUGGUUACUCGACCAUGGGGUCGAGUGAUUGGCAAGAACGGCUCCAAUGUUACUCGACCAAGGGGUCGAGUGUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:24   GUG-UGAGCUGGGGAACCAGCUCAU   1   |||-||||||||||*|||||||||| targets:88   CACCACUCGACCCCCUGGUCGAGUA   112 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   GUG-UGAGCUGGGGAACCAGCUCAU   1   |||-||||||||||*|||||||||| targets:533   CACCACUCGACCCCAUGGUCGAGUA   557 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   GU---GUGAGCUGGGGAACCAGCUCAU   1   ||---|||||||||||*|||||||||| targets:485   CAGACCACUCGACCCCGUGGUCGAGUA   511 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT025674.1	ncRNA:24   GUG---UGAGCUGGGGAACCAGCUCAU   1   |||---||||||||||*|||||||||| targets:304   CACCUUACUCGACCCCCUGGUCGAGUA   330 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   GU---GUGAGCUGGGGAACCAGCUCAU   1   ||---|||||||||||*|||||||||| targets:120   CAAACCACUCGACCCCCUGGUCGAGUA   146 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   GU---GUGAGCUGGGGAACCAGCUCAU   1   ||---|||||||||||*|||||||||| targets:495   CAAACCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   GU---GUGAGCUGGGGAACCAGCUCAU   1   ||---|||||||||||*|||||||||| targets:495   CAAACCACUCGACCCCCUGGUCGAGUA   521 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   GUGUGAGCUGGGGAACCAGCUCAU   1   **|||||||||||*|||||||||| targets:229   GCCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   GUG--UGAGCUGGGGAACCAGCUCAU   1   ||=--||||||||||*|||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUGUGAGCUGGGGAACCAGCUCAU   1   **|||||||||||*|||||||||| targets:229   GCCACUCGACCCCCUGGUCGAGUA   252 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUG--UGAGCUGGGGAACCAGCUCAU   1   ||=--||||||||||*|||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGAGUA   203 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   GUGUGAGCUGGGGAACCAGCUCAU   1   **|||||||||||*|||||||||| targets:1570   AUCACUCGACCCCCUGGUCGAGUA   1593 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:24   GUGUGAGCUGGGGAACCAGCUCAU   1   |*=||||||||=|||||||||||= targets:2013   CCUACUCGACCUCUUGGUCGAGUG   2036 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   GUG---UGAGCUGGGGAACCAGCUCAU   1   ||=---||||*|||||*|||||||||| targets:297   CAUGUUACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUG---UGAGCUGGGGAACCAGCUCAU   1   ||=---||||*|||||*|||||||||| targets:297   CAUGUUACUCAACCCCCUGGUCGAGUA   323 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   GU---GUGAGCUGGGGAACCAGCUCAU   1   ||---|||||||||||*|||||||||= targets:1205   CAAACCACUCGACCCCGUGGUCGAGUG   1231 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget