Search result

BaseInfo

ncRNA ID novel_ahy_miR395
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A10:102523123-102523175 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UUUAUACUGUAAACGAGAUACGUG - 24
Stem-loop(if miRNA) --      C             -   G
  UUUAUA UGUAAACGAGAUA CGU G
  |||||| ||||||||||||| |||
  AAAUGU ACAUUUGCUCUAU GUA A
GU      C             U   A
Stem-loop sequence UUUAUACUGUAAACGAGAUACGUGGAAAUGUUAUCUCGUUUACACUGUAAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   GUGCAUAGAGCAAAUGUCAUAUUU   1
  |||||||||||||||||||=||||
targets:80   CACGUAUCUCGUUUACAGUGUAAA   103

1.5 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GUGC---AUAGAGCAAAUGUCAUAUUU   1
  ||=|---||||||*||||||||=||||
targets:20   CAUGGUUUAUCUCAUUUACAGUGUAAA   46

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   GUGCAUAGAGCAAAUGUCAUAUUU   1
  **||||||||*||||||*||||||
targets:60   GCCGUAUCUCAUUUACACUAUAAA   83

2.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   GUGC---------AUAGAGCAAAUGUCAUAUUU   1
  ||||---------||||||*||||||||=||||
targets:36   CACGCCCCAACCUUAUCUCAUUUACAGUGUAAA   68

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget