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BaseInfo

ncRNA ID novel_ahy_miR366
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:89769297-89769467 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 148 - UAAAUUCUGAUGAUCUUCUAGCAU - 171
Stem-loop(if miRNA) --A       GC                   UAAC     --A    A       AUUUAAA     -----AA    AGUGUGGGAUAAA
   CUAGAGG  CAUUAGAAUUUAUUAUUUU    CAUCA   UUGG CAUCAAU       AGUGU       CCUA             A
   |||||||  |||||||||||||||||||    |||||   |||| |||||||       |||||       ||||             U
   GAUCUUC  GUAGUCUUAAAUAAUAAAA    GUAGU   AAUC GUAGUUG       UUACG       AAUC             A
UAC       UA                   CACA     GAA    G       -----GA     AAAAUUA    AUUAGAUUAUUAU
Stem-loop sequence ACUAGAGGGCCAUUAGAAUUUAUUAUUUUUAACCAUCAAUUGGACAUCAAUAUUUAAAAGUGUAACCUAAGUGUGGGAUAAAAUAUAUUAUUAGAUUACUAAAUUAAAAGCAUUAGGUUGAUGGCUAAAAGUGAUGACACAAAAUAAUAAAUUCUGAUGAUCUUCUAGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR571482.1
ncRNA:24   UACGAUCUUCUAGUAGUCUUAAAU   1
  |||||||*=*||||||||||||||
targets:359   AUGCUAGCGAAUCAUCAGAAUUUA   382

3.0 TSA: Arachis hypogaea Ahy.Unigene32774 mRNA sequence NA coding protein psRNATarget
EZ755327.1
ncRNA:24   UACGAUCUUCUAGUAGUCUUAAAU   1
  ||*=|||*=|=|||||||||||||
targets:208   AUAUUAGUGGGUCAUCAGAAUUUA   231

3.0 TSA: Arachis hypogaea CL352Contig3.Arhy mRNA sequence NA coding protein psRNATarget
GAER01028620.1
ncRNA:24   UACGAUCUUCUAGUAGUCUUAAAU   1
  ||*=|||*=|=|||||||||||||
targets:1184   AUAUUAGUGGGUCAUCAGAAUUUA   1207

3.0 TSA: Arachis hypogaea Unigene28638 mRNA sequence NA coding protein psRNATarget
GAER01038262.1
ncRNA:24   UACGAUCUUCUAGUAGUCUUAAAU   1
  ||-|*||=|*|||||||||||||=
targets:888   AU-CAAGGAAAUCAUCAGAAUUUG   910

3.0 TSA: Arachis hypogaea Unigene38288 mRNA sequence NA coding protein psRNATarget