ncRNA ID | novel_ahy_miR366 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A01:89769297-89769467 [+] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 148 - UAAAUUCUGAUGAUCUUCUAGCAU - 171 |
Stem-loop(if miRNA) |
--A       GC                   UAAC     --A    A       AUUUAAA     -----AA    AGUGUGGGAUAAA    CUAGAGG  CAUUAGAAUUUAUUAUUUU    CAUCA   UUGG CAUCAAU       AGUGU       CCUA             A    |||||||  |||||||||||||||||||    |||||   |||| |||||||       |||||       ||||             U    GAUCUUC  GUAGUCUUAAAUAAUAAAA    GUAGU   AAUC GUAGUUG       UUACG       AAUC             A UAC       UA                   CACA     GAA    G       -----GA     AAAAUUA    AUUAGAUUAUUAU |
Stem-loop sequence | ACUAGAGGGCCAUUAGAAUUUAUUAUUUUUAACCAUCAAUUGGACAUCAAUAUUUAAAAGUGUAACCUAAGUGUGGGAUAAAAUAUAUUAUUAGAUUACUAAAUUAAAAGCAUUAGGUUGAUGGCUAAAAGUGAUGACACAAAAUAAUAAAUUCUGAUGAUCUUCUAGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR571482.1 |
|
3.0 | TSA: Arachis hypogaea Ahy.Unigene32774 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ755327.1 |
|
3.0 | TSA: Arachis hypogaea CL352Contig3.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01028620.1 |
|
3.0 | TSA: Arachis hypogaea Unigene28638 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01038262.1 |
|
3.0 | TSA: Arachis hypogaea Unigene38288 mRNA sequence | NA | coding protein | psRNATarget |