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BaseInfo

ncRNA ID novel_ahy_miR356
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A01:29120353-29120536 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 161 - UAAGGACCUAAUUGAAAAUUUCGC - 184
Stem-loop(if miRNA) --UAA     U                         A AU                A AAUUUAAACAUAUAUCAUUCA CA    AAAAAUAAGGACAAAG
     GGACC AAUUGAAAAUUUCGCAAAAUUAUAG G  UAAUAGAGUAAUUAAA C                     G  UUUA                A
     ||||| ||||||||||||||||||||||||| |  |||||||||||||||| |                     |  ||||                U
     CCUGG UUAACUUUUAAAGCGUUUUGAUAUC C  GUUGUUUCAUUAAUUU G                     A  UAAA                C
AUAUA     C                         C CG                G -------------------AA --    AAAAUUUAUGAAUUAA
Stem-loop sequence UAAGGACCUAAUUGAAAAUUUCGCAAAAUUAUAGAGAUUAAUAGAGUAAUUAAAACAAUUUAAACAUAUAUCAUUCAGCAUUUAAAAAAUAAGGACAAAGAUCAAUUAAGUAUUUAAAAAAAUAAAGGUUUAAUUACUUUGUUGGCCCCUAUAGUUUUGCGAAAUUUUCAAUUCGGUCCAUAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ722770.1
ncRNA:24   CGCUUUAAAAGUUAAUCCAGGAAU   1
  *|*|||||||||||||||||=|||
targets:126   ACCAAAUUUUCAAUUAGGUCUUUA   149

1.5 TSA: Arachis hypogaea CL1Contig1786.Arhy mRNA sequence NA coding protein psRNATarget
EZ746570.1
ncRNA:24   CGCUUUAAAAGUUAAUCCAGGAAU   1
  ||||||||||=||*||||||||||
targets:375   GCGAAAUUUUUAACUAGGUCCUUA   398

2.5 TSA: Arachis hypogaea CL13865Contig1.Arhy mRNA sequence NA coding protein psRNATarget