ncRNA ID | novel_ahy_miR356 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A01:29120353-29120536 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380 |
Length | 24 |
Mature sequence(if miRNA) | 161 - UAAGGACCUAAUUGAAAAUUUCGC - 184 |
Stem-loop(if miRNA) |
--UAA     U                         A AU                A AAUUUAAACAUAUAUCAUUCA CA    AAAAAUAAGGACAAAG      GGACC AAUUGAAAAUUUCGCAAAAUUAUAG G  UAAUAGAGUAAUUAAA C                     G  UUUA                A      ||||| ||||||||||||||||||||||||| |  |||||||||||||||| |                     |  ||||                U      CCUGG UUAACUUUUAAAGCGUUUUGAUAUC C  GUUGUUUCAUUAAUUU G                     A  UAAA                C AUAUA     C                         C CG                G -------------------AA --    AAAAUUUAUGAAUUAA |
Stem-loop sequence | UAAGGACCUAAUUGAAAAUUUCGCAAAAUUAUAGAGAUUAAUAGAGUAAUUAAAACAAUUUAAACAUAUAUCAUUCAGCAUUUAAAAAAUAAGGACAAAGAUCAAUUAAGUAUUUAAAAAAAUAAAGGUUUAAUUACUUUGUUGGCCCCUAUAGUUUUGCGAAAUUUUCAAUUCGGUCCAUAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ722770.1 |
|
1.5 | TSA: Arachis hypogaea CL1Contig1786.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ746570.1 |
|
2.5 | TSA: Arachis hypogaea CL13865Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |