Search result

BaseInfo

ncRNA ID novel_ahy_miR354
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A07:3302847-3302902 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UUUGAUUAUACGUGUUUACUGAGU - 24
Stem-loop(if miRNA) --                 A       U
  UUUGAUUAUACGUGUUU CUGAGUU G
  ||||||||||||||||| |||||||
  AAACUAAUAUGCACAAA GACUCAG C
UC                 C       U
Stem-loop sequence UUUGAUUAUACGUGUUUACUGAGUUUGCUGACUCAGCAAACACGUAUAAUCAAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000180.1
ncRNA:24   UGAGUCAUUUGUGCAUAUUAGUUU   1
  ||||||||||||||||||||||||
targets:179   ACUCAGUAAACACGUAUAAUCAAA   202

0.0 TSA: Arachis hypogaea Unigene180 mRNA sequence NA coding protein psRNATarget
JR579792.1
ncRNA:24   UGAGUCAUUUGUGCAUAUUAGUUU   1
  ||||||*|||||||||||||||||
targets:32   ACUCAGCAAACACGUAUAAUCAAA   55

1.0 TSA: Arachis hypogaea Ahy.Unigene45597 mRNA sequence NA coding protein psRNATarget
GAER01045893.1
ncRNA:24   UGAGUCAUUUGUGCAUAUUAGUUU   1
  **||||||||*|*|||||||||||
targets:25   UAUCAGUAAAAAAGUAUAAUCAAA   48

2.5 TSA: Arachis hypogaea Unigene45928 mRNA sequence NA coding protein psRNATarget