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BaseInfo

ncRNA ID novel_ahy_miR349
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A07:12587919-12587979 [-]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 38 - UACACUGUAAACGAGAUAAGACAC - 61
Stem-loop(if miRNA) --UACAC             A   --ACG  A
       UGUAAACGAGAUA GAC     UC G
       ||||||||||||| |||     ||
       ACAUUUGCUCUAU CUG     AG C
AAAUAUC             -   CACCA  C
Stem-loop sequence UACACUGUAAACGAGAUAAGACACGUCAGCCGAACCACGUCUAUCUCGUUUACACUAUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01058827.1
ncRNA:24   CACAGAAUAGAGCAAAUGUCACAU   1
  ****|*||||||||||||||||||
targets:78   UGCACGUAUCUCGUUUACAGUGUA   101

1.0 TSA: Arachis hypogaea Unigene58874 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   CACAGAAUAGAGCAAAUGUCACAU   1
  ****||||||||*|||||||||||
targets:43   CAACCUUAUCUCAUUUACAGUGUA   66

1.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CACAGAAUAGAGCAAAUGUCACAU   1
  *||*=|||||||*|||||||||||
targets:21   AUGGUUUAUCUCAUUUACAGUGUA   44

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR574604.1
ncRNA:24   CACAGAAUAGAGCAAAUGUCACAU   1
  ****|||||||||||||||*||||
targets:175   UAUACUUAUCUCGUUUACACUGUA   198

1.5 TSA: Arachis hypogaea Ahy.Unigene37641 mRNA sequence NA coding protein psRNATarget
JR578749.1
ncRNA:24   CACAGAAUAGAGCAAAUGUCACAU   1
  |||*|||||*|||||||=||||||
targets:145   GUGCCUUAUGUCGUUUAUAGUGUA   168

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget