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BaseInfo

ncRNA ID novel_ahy_miR344
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A10:78646657-78646772 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 21
Mature sequence(if miRNA) 1 - UCACAUGAAGUUGACUGCACC - 21
Stem-loop(if miRNA) --              CA           GU A   A  ----------------       AAUU
  UGUAGUCAACUUCA  UGAAGUUGAUA  U AGA CC                GUUAAAU    U
  ||||||||||||||  |||||||||||  | ||| ||                |||||||
  ACGUCAGUUGAAGU  ACUUCAACUAU  A UCU GG                CAGUUUA    G
CC              AC           UG C   C  AAAUCUACUUUUAAAU       AUUA
Stem-loop sequence UGUAGUCAACUUCACAUGAAGUUGAUAGUUAAGAACCGUUAAAUAAUUUGAUUAAUUUGACUAAAUUUUCAUCUAAAGGCUCUCAGUUAUCAACUUCACAUGAAGUUGACUGCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR550778.1
ncRNA:21   CCACGUCAGUUGAAGUACACU   1
  |||||||||||||||||||*|
targets:34   GGUGCAGUCAACUUCAUGUAA   54

1.5 TSA: Arachis hypogaea Ahy.Unigene10402 mRNA sequence NA coding protein psRNATarget
EZ750422.1
ncRNA:21   CCACGUCAGUUGAAGUACACU   1
  |*|||||||=|||||||||||
targets:375   GUUGCAGUCGACUUCAUGUGA   395

1.5 TSA: Arachis hypogaea CL13676Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01000868.1
ncRNA:21   CCACGUCAGUUGAAGUACACU   1
  *|||||||||||||||*||||
targets:228   AGUGCAGUCAACUUCACGUGA   248

1.5 TSA: Arachis hypogaea Unigene869 mRNA sequence NA coding protein psRNATarget
GAER01001304.1
ncRNA:21   CCACGUCAGUUGAAGUACACU   1
  ||||||*|||||||||*||||
targets:196   GGUGCAAUCAACUUCACGUGA   216

2.5 TSA: Arachis hypogaea Unigene1305 mRNA sequence NA coding protein psRNATarget
GAER01028018.1
ncRNA:21   CCACGUCAGUUGAAGUACACU   1
  *|||*|||||||||||*||||
targets:947   AGUGAAGUCAACUUCACGUGA   967

2.5 TSA: Arachis hypogaea Unigene28036 mRNA sequence NA coding protein psRNATarget