Search result

BaseInfo

ncRNA ID novel_ahy_miR312
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:50635340-50635429 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 20
Mature sequence(if miRNA) 71 - AUGAAGUGUUUGGGGGAACU - 90
Stem-loop(if miRNA) --      UG          ----------   UG    AGCUAGUAACCA
  UUCCUC  AACGCUUCAU          GUG  UGCU            U
  ||||||  ||||||||||          |||  ||||
  AAGGGG  UUGUGAAGUA          AUG  AUAU            U
UC      GU          AACUUCUUGU   --    AUACAAUAUCGU
Stem-loop sequence UUCCUCUGAACGCUUCAUGUGUGUGCUAGCUAGUAACCAUUUGCUAUAACAUAUAUAGUAUGUUCUUCAAAUGAAGUGUUUGGGGGAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR564482.1
ncRNA:20   UCAAGGGGGUUUGUGAAGUA   1
  **|||||||||||||||||*
targets:177   UCUUCCCCCAAACACUUCAA   196

2.0 TSA: Arachis hypogaea Ahy.Unigene24594 mRNA sequence NA coding protein psRNATarget
GAER01031105.1
ncRNA:20   UCAAGGGGGUUUGUGAAGUA   1
  **|||||||||||||||||*
targets:187   UCUUCCCCCAAACACUUCAA   206

2.0 TSA: Arachis hypogaea Unigene31126 mRNA sequence NA coding protein psRNATarget
JR547817.1
ncRNA:20   UCAAGGGGGUUUGUGAAGUA   1
  ||||||=||||||=||||||
targets:518   AGUUCCUCCAAACGCUUCAU   537

2.5 TSA: Arachis hypogaea Ahy.Unigene7341 mRNA sequence NA coding protein psRNATarget
GAER01037706.1
ncRNA:20   UCAAGGGGGUUUGUGAAGUA   1
  ||||||=||||||=||||||
targets:633   AGUUCCUCCAAACGCUUCAU   652

2.5 TSA: Arachis hypogaea Unigene37730 mRNA sequence NA coding protein psRNATarget
JR566041.1
ncRNA:20   UCAAGGGGGUUUGUGAAGUA   1
  **|||||=||||||||||||
targets:498   UUUUCCCUCAAACACUUCAU   517

2.5 TSA: Arachis hypogaea Ahy.Unigene26242 mRNA sequence NA coding protein psRNATarget
EZ742220.1
ncRNA:20   UCAAGGGGGUUUGUGAAGUA   1
  *|||||*|||||*|||||||
targets:747   UGUUCCACCAAAAACUUCAU   766

2.5 TSA: Arachis hypogaea CL10041Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ746578.1
ncRNA:20   UCAAGGGGGUUUGUGAAGUA   1
  |||||*=||||||||||||*
targets:41   AGUUCGUCCAAACACUUCAA   60

3.0 TSA: Arachis hypogaea CL13917Contig1.Arhy mRNA sequence NA coding protein psRNATarget