Search result

BaseInfo

ncRNA ID novel_ahy_miR311
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:50622887-50622963 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 21
Mature sequence(if miRNA) 57 - UGAAGUGUUUGGGGGAACUCU - 77
Stem-loop(if miRNA) --        UG          G   CC     UC U GA
  AGUUCCUC  AACGCUUCAU UGA  GAGGG  G C  C
  ||||||||  |||||||||| |||  |||||  | |
  UCAAGGGG  UUGUGAAGUA ACU  CUCCU  C G  C
UC        GU          -   --     UC U AU
Stem-loop sequence AGUUCCUCUGAACGCUUCAUGUGACCGAGGGUCGUCGACCUAGUCCUUCCUCUCAAUGAAGUGUUUGGGGGAACUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR564482.1
ncRNA:21   UCUCAAGGGGGUUUGUGAAGU   1
  ****|||||||||||||||||
targets:175   CAUCUUCCCCCAAACACUUCA   195

2.0 TSA: Arachis hypogaea Ahy.Unigene24594 mRNA sequence NA coding protein psRNATarget
GAER01031105.1
ncRNA:21   UCUCAAGGGGGUUUGUGAAGU   1
  ****|||||||||||||||||
targets:185   CAUCUUCCCCCAAACACUUCA   205

2.0 TSA: Arachis hypogaea Unigene31126 mRNA sequence NA coding protein psRNATarget
EZ746578.1
ncRNA:21   UCUCAAGGGGGUUUGUGAAGU   1
  |||||||*=||||||||||||
targets:39   AGAGUUCGUCCAAACACUUCA   59

2.5 TSA: Arachis hypogaea CL13917Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR540820.1
ncRNA:21   UCUCAAGGGGGUUUGUGAAGU   1
  *|||**=||||||||||||||
targets:2740   UGAGGAUCCCCAAACACUUCA   2760

3.0 TSA: Arachis hypogaea Ahy.Unigene89 mRNA sequence NA coding protein psRNATarget