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BaseInfo

ncRNA ID novel_ahy_miR309
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:19591656-19591812 [+]
Reference genome Aradu_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - AUGGAAGUGUGUUCAUGGAUGUGC - 24
Stem-loop(if miRNA) --              A        C       -A     C    UU   -----------A    GUUUAAUAGAAGUGUCUU
  AUGGAAGUGUGUUC UGGAUGUG CUAAUAA  AAUGU UUUU  AUA            CUGU                  U
  |||||||||||||| |||||||| |||||||  ||||| ||||  |||            ||||                  A
  UACCUUCACACAAG AUCUACAC GAUUAUU  UUAUA AAAA  UAU            CUGU                  U
AG              C        A       AA     U    UU   GUAUAUAUUUCU    GUAGGUCUUUUAUAUAGC
Stem-loop sequence AUGGAAGUGUGUUCAUGGAUGUGCCUAAUAAAAAUGUCUUUUUUAUAACUGUGUUUAAUAGAAGUGUCUUUAUCGAUAUAUUUUCUGGAUGUGUCUCUUUAUAUAUGUAUUUAAAAUAUAUUAAUUAUUAGACACAUCUACGAACACACUUCCAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR546305.1
ncRNA:24   CGUGUAGGUACUUGUGUGAAGGUA   1
  *||||||||*||||||||||||||
targets:8   ACACAUCCACGAACACACUUCCAU   31

1.0 TSA: Arachis hypogaea Ahy.Unigene5750 mRNA sequence NA coding protein psRNATarget
GAER01035600.1
ncRNA:24   CGUGUAGGUACUUGUGUGAAGGUA   1
  *||||||||*||||||||||||||
targets:489   ACACAUCCACGAACACACUUCCAU   512

1.0 TSA: Arachis hypogaea Unigene35623 mRNA sequence NA coding protein psRNATarget