ncRNA ID | novel_ahy_miR306 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A05:15261237-15261410 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR2922380;SRR2922381 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGGACUGAAGGGAGCUCCCU - 21 |
Stem-loop(if miRNA) |
--A     UU          CUC     U    A            A -  G   AC       UC  AA         AAGAUAUAG    GAGCU  CUUCAGUCCA   AUGGG GACA UAAGAUUUAAUU G CU CCG  UCAUUCA  CA  UGCUGAGUG         A    |||||  ||||||||||   ||||| |||| |||||||||||| | || |||  |||||||  ||  |||||||||    CUCGA  GAAGUCAGGU   UAUCC UUGU AUUCUAAGUUAA C GA GGC  AGUAAGU  GU  AUGACUCAC         U UCC     GG          UCA     U    -            A A  G   GU       GA  AA         AUAGAGAGA |
Stem-loop sequence | AGAGCUUUCUUCAGUCCACUCAUGGGUGACAAUAAGAUUUAAUUAGCUGCCGACUCAUUCAUCCAAAUGCUGAGUGAAGAUAUAGAUAGAGAGAUACACUCAGUAAAUGAGUGAAUGAUGCGGGAGACAAAUUGAAUCUUAUGUUUCCUAUACUUGGACUGAAGGGAGCUCCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01048873.1 |
|
2.5 | TSA: Arachis hypogaea Unigene48910 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01039202.1 |
|
2.5 | TSA: Arachis hypogaea Unigene39229 mRNA sequence | NA | coding protein | psRNATarget |