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BaseInfo

ncRNA ID novel_ahy_miR306
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A05:15261237-15261410 [-]
Reference genome Aradu_v1.0
Source SRR2922380;SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UUGGACUGAAGGGAGCUCCCU - 21
Stem-loop(if miRNA) --A     UU          CUC     U    A            A -  G   AC       UC  AA         AAGAUAUAG
   GAGCU  CUUCAGUCCA   AUGGG GACA UAAGAUUUAAUU G CU CCG  UCAUUCA  CA  UGCUGAGUG         A
   |||||  ||||||||||   ||||| |||| |||||||||||| | || |||  |||||||  ||  |||||||||
   CUCGA  GAAGUCAGGU   UAUCC UUGU AUUCUAAGUUAA C GA GGC  AGUAAGU  GU  AUGACUCAC         U
UCC     GG          UCA     U    -            A A  G   GU       GA  AA         AUAGAGAGA
Stem-loop sequence AGAGCUUUCUUCAGUCCACUCAUGGGUGACAAUAAGAUUUAAUUAGCUGCCGACUCAUUCAUCCAAAUGCUGAGUGAAGAUAUAGAUAGAGAGAUACACUCAGUAAAUGAGUGAAUGAUGCGGGAGACAAAUUGAAUCUUAUGUUUCCUAUACUUGGACUGAAGGGAGCUCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01048873.1
ncRNA:21   UC--CCUCGAGGGAAGUCAGGUU   1
  ||--|||||||||||||||||||
targets:425   AGAAGGAGCUCCCUUCAGUCCAA   447

2.5 TSA: Arachis hypogaea Unigene48910 mRNA sequence NA coding protein psRNATarget
GAER01039202.1
ncRNA:21   UCCCUCGAGGGAAGUCAGGUU   1
  ***||||||||||||*|||||
targets:74   UUUGAGCUCCCUUCACUCCAA   94

2.5 TSA: Arachis hypogaea Unigene39229 mRNA sequence NA coding protein psRNATarget