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BaseInfo

ncRNA ID novel_ahy_miR305
Species Arachis hypogaea
Class miRNA
Genome position Aradu.A10:105599514-105599724 [-]
Reference genome Aradu_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 188 - UGUUAACUGAUAGCAUACAUGACA - 211
Stem-loop(if miRNA) --UG    C          C    C    A CG   UC             C       A    C    A C   C          ----  -A       UU  GAA
    UUAA UGAUAGCAUA AUGA ACGU A  UGU  AAUUAGAUGUUGA UAAAUAU UUUA AAAA U UAU AAUUUAGUCA    CU  GGUUAUA  AA   U
    |||| |||||||||| |||| |||| |  |||  ||||||||||||| ||||||| |||| |||| | ||| ||||||||||    ||  |||||||  ||
    AAUU AUUAUUGUAU UAUU UGUA U  ACA  UUAAUCUAUAACU GUUUAUA AAAU UUUU A AUA UUAAAUUAGU    GA  UUAAUAU  UU   A
UUGG    A          A    A    C AU   GA             A       C    A    C A   A          AAAA  GG       UU  AGA
Stem-loop sequence UGUUAACUGAUAGCAUACAUGACACGUAACGUGUUCAAUUAGAUGUUGACUAAAUAUAUUUACAAAAAUCUAUCAAUUUAGUCACUAGGUUAUAUUAAGAAUAAGAUUUUUAUAAUUGGAGAAAAUGAUUAAAUUAAUAAACUUUUAUAAACAUAUUUGAUCAAUAUCUAAUUAGACAUAUCAUGUAUUAUAUAUGUUAUUAAUUAAGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747421.1
ncRNA:24   ACAGUACAUACGAUAGUCAAUUGU   1
  ||||||||||||||||||||||=|
targets:726   UGUCAUGUAUGCUAUCAGUUAAUA   749

1.5 TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence NA coding protein psRNATarget