ncRNA ID | novel_ahy_miR305 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Aradu.A10:105599514-105599724 [-] |
Reference genome | Aradu_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 188 - UGUUAACUGAUAGCAUACAUGACA - 211 |
Stem-loop(if miRNA) |
--UG    C          C    C    A CG   UC             C       A    C    A C   C          ----  -A       UU  GAA     UUAA UGAUAGCAUA AUGA ACGU A  UGU  AAUUAGAUGUUGA UAAAUAU UUUA AAAA U UAU AAUUUAGUCA    CU  GGUUAUA  AA   U     |||| |||||||||| |||| |||| |  |||  ||||||||||||| ||||||| |||| |||| | ||| ||||||||||    ||  |||||||  ||     AAUU AUUAUUGUAU UAUU UGUA U  ACA  UUAAUCUAUAACU GUUUAUA AAAU UUUU A AUA UUAAAUUAGU    GA  UUAAUAU  UU   A UUGG    A          A    A    C AU   GA             A       C    A    C A   A          AAAA  GG       UU  AGA |
Stem-loop sequence | UGUUAACUGAUAGCAUACAUGACACGUAACGUGUUCAAUUAGAUGUUGACUAAAUAUAUUUACAAAAAUCUAUCAAUUUAGUCACUAGGUUAUAUUAAGAAUAAGAUUUUUAUAAUUGGAGAAAAUGAUUAAAUUAAUAAACUUUUAUAAACAUAUUUGAUCAAUAUCUAAUUAGACAUAUCAUGUAUUAUAUAUGUUAUUAAUUAAGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ747421.1 |
|
1.5 | TSA: Arachis hypogaea CL19737Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |